Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1211 ATGCAGATGAAAACACAGTTTTTCATTTTCTTCTGTTACATTGTCTTTTTTTGTTTCTCTTACAGTTTTTCTGCTGCTTTGAATAATGAAGTATTGGCTTTGCTTTCGATAAAATCTGGTCTTGTTGATCCTTTAAACGCTCTTGAGGATTGGAAGTTGGATTCACCTCATTGTAACTGGACCGGAATAAAATGCAACTCGGCCGGAACCGTGGAGATTCTCGATCTCTCCCGCAAGAATCTCAGTGGTGTAGTGTCCAATGACATACAAAGACTTCAATCTCTTACTTCTCTTAACTTATGTTGCAATGCATTTTCATCAAAATTACCAAAATCTATATCCAACCTTACCACATTGAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTTCCATTAGGACTTGGAAAGGCGTCGAGATTAACAGCGTTAAATGGTTCGAGCAATGAATTCTCAGGTACAATTCCTTTGGACATTGGAAATGCAACTTTGTTAGAAATGCTTGATCTCAGAGGCAGTTTCTTTGAAGGCTCAATTCCGAAAACATTTGGAAACTTGCATAAGTTGAAGTTTCTTGGTTTATCTGGGAATAATCTCACCGGAAAAATTCCTGGCGAGCTTGGAAAACTTTCATCATTGGAATATATGATTCTTGGATATAACGAATTCGAAGGCGAGATTCCATTAGAATTTGGAAATCTCGCTAGTCTTGAGTATCTTGATTTAGCAGTTTCCAATCTTGGTGGTGAGATTCCATATGAATTGGGAAATCTCAAGCTATTGGATACACTTTTCTTATACAACAACAATTTTGAAGGAAGAATTCCATCACAAATTGGTAACATGACTTCTCTGCAGTTTTTGGATCTTTCTGATAACATTTTGACAGGAAAAATTCCAGATGAAATAGGTCTGCTGAAGAATTTGAAGCTTTTGAACTTCATGGGAAACCAGTTATCTGGTTTTGTTCCTTTTGGCATTGGTAATTTGCCTCAACTGGAAGTTCTTGAGCTATGGAACAATTCATTATCAGGTCCATTGCCTAGTAACCTCGGCAAGAATTCACAGTTGCAATGGTTGGATGTATCGTCCAATTCACTATCCGGAGAGATTCCGGAAACTCTTTGCAGCCAAGGAAATCTCACAAAGCTGATACTTTTCAACAATGCTTTCTCTGGTTCAATTCCATCAAGCTTATCAAAATGTTCTTCGCTTGTTCGTGTTCGAATCCACAACAATTTTCTGTCTGGATCCGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTAGCTAACAATAGTCTCACTAGTGAAATTCCAGATGATATTCCTTCTTCAACATCTCTTTCTTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTACCTTCCACTATTCTCTCCATTCCAAATCTTCAAGTTTTTATGGTCTCCAACAACAACTTAGAAGGTAAAATACCAAACCAATTTCAGGACTCTCCTTCACTTACTGTTCTTGATCTCTCGTCGAATCATTTATCCGGCGCCATTCCAGAAAGCATAGGTTCATGTCAAAAACTAGTAAATTTGAACCTGCAAAACAACCTTTTGATAGGTGAAATCCCAAAAGAACTAGCGAACATGCCTACAATGGCAATGCTTGATCTCTCCAACAACTCGTTGACCGGTCATATACCTGAAAACTTTGGTTTATCACCAGCTTTAGAAGCATTTAATGTTTCATACAACAAGCTTGAAGGTTCTGTGCCAGAAAATGGTATGCTAAGAACTATAAACCCGAACAATCTCGTCGGTAATGCTGGCCTATGTGGCGGAATTCTCCCTTCATGTGACCAAAACTCGGCATACTCCTCAAGGTATGGAAGTTCACATGCAAAACATGTTATCACAGGATGGATCATTGGAATATCATCAATTCTAGCCATTGGAATTACAATTTTGCTAGCAAGATCTTTATATGTAAGGTGGTACACTGGTGGATTTTGCTTCAAAGAGAGATTTTATAAAGGTAACAAAGGGTGGCCATGGAGATTAATCGCATTTCAGAGACTTGGTTTTACAAGTACCGAAATTCTAGCTTGCATCAAGGAAACAAATGTAATCGGAATGGGAGCTACCGGCATTGTTTACAAAGCCGAGGTACCGCAATCCAATACAATCGTAGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGAAGAGGAAGTGATGAACTTGTTGGGGAGGTGAACCTCTTAGGGAGACTAAGACACAGGAACATTGTTAGACTGTTAGGATTTCTTCACAATGACACTGATTTGATGATAGTTTATGAATTTATGCATAATGGAAACCTAGGAGATGCCTTGCATGGTAAGCAAGCTGTTAGACAGCTTGTTGATTGGGTTTCAAGATATAACATAGCTCTGGGAGTTGCTCAAGGACTTGCTTATCTTCATCACGACTGTTACCCGCCGGTTATCCATCGCGACATTAAGTCAAATAATATACTGCTTGATGCAAATCTTGAAGCACGGATAGCAGATTTCGGGTTAGCCAAGATGATGATCCGGAAGAACGAAACTGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTACGGAGTAGTTTTGTTGGAGCTTGTGACCGGAAAGAGGCCATTAGATGCGGAATTCGGAGAGAGTGTAGACATTGTAGAGTGGATTAGAAGGAAGATCAGAGAGAAGAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTGCAGACATGTTATAGAAGAAATGCTTTTAGTTTTAAGAATAGCAGTTGTTTGCACTGCTAAGCTTCCTAAAGACAGACCAAGCATGAGGGATGTGATAATGATGCTTGGAGAAGCAAAGCCTAGAAGAAAGATTAGTGGAAAAAATGAAACATCTTTAGCAGATAACATGAATAACAAGGAGATGTCAGTTTTTAGTACATCACCAGTTAGTGGTCTTCTCTAG 3054 0.389 MQMKTQFFIFFCYIVFFCFSYSFSAALNNEVLALLSIKSGLVDPLNALEDWKLDSPHCNWTGIKCNSAGTVEILDLSRKNLSGVVSNDIQRLQSLTSLNLCCNAFSSKLPKSISNLTTLNILDVSQNFFIGEFPLGLGKASRLTALNGSSNEFSGTIPLDIGNATLLEMLDLRGSFFEGSIPKTFGNLHKLKFLGLSGNNLTGKIPGELGKLSSLEYMILGYNEFEGEIPLEFGNLASLEYLDLAVSNLGGEIPYELGNLKLLDTLFLYNNNFEGRIPSQIGNMTSLQFLDLSDNILTGKIPDEIGLLKNLKLLNFMGNQLSGFVPFGIGNLPQLEVLELWNNSLSGPLPSNLGKNSQLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGSIPSSLSKCSSLVRVRIHNNFLSGSVPVGLGKLEKLQRLELANNSLTSEIPDDIPSSTSLSFIDLSRNKLHSSLPSTILSIPNLQVFMVSNNNLEGKIPNQFQDSPSLTVLDLSSNHLSGAIPESIGSCQKLVNLNLQNNLLIGEIPKELANMPTMAMLDLSNNSLTGHIPENFGLSPALEAFNVSYNKLEGSVPENGMLRTINPNNLVGNAGLCGGILPSCDQNSAYSSRYGSSHAKHVITGWIIGISSILAIGITILLARSLYVRWYTGGFCFKERFYKGNKGWPWRLIAFQRLGFTSTEILACIKETNVIGMGATGIVYKAEVPQSNTIVAVKKLWRSGNDVEVGRGSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDLMIVYEFMHNGNLGDALHGKQAVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELVTGKRPLDAEFGESVDIVEWIRRKIREKKSLEEALDPSVGNCRHVIEEMLLVLRIAVVCTAKLPKDRPSMRDVIMMLGEAKPRRKISGKNETSLADNMNNKEMSVFSTSPVSGLL* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1211 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Psa3g1211 1017 SUPERFAMILY Protein kinase-like (PK-like) 699 979 IPR011009 -
Psa3g1211 1017 Gene3D Phosphorylase Kinase; domain 1 693 783 - -
Psa3g1211 1017 ProSiteProfiles Protein kinase domain profile. 702 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1211 1017 ProSiteProfiles Leucine-rich repeat profile. 286 308 IPR001611 GO:0005515
Psa3g1211 1017 Pfam Protein kinase domain 704 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1211 1017 Gene3D Ribonuclease Inhibitor 139 207 IPR032675 -
Psa3g1211 1017 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Psa3g1211 1017 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Psa3g1211 1017 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 994 - -
Psa3g1211 1017 ProSitePatterns Protein kinases ATP-binding region signature. 708 732 IPR017441 GO:0005524
Psa3g1211 1017 SUPERFAMILY RNI-like 171 547 - -
Psa3g1211 1017 Gene3D Transferase(Phosphotransferase) domain 1 784 1006 - -
Psa3g1211 1017 Gene3D Ribonuclease Inhibitor 357 621 IPR032675 -
Psa3g1211 1017 SMART serkin_6 702 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1211 1017 PANTHER UNNAMED PRODUCT 13 994 - -
Psa3g1211 1017 Pfam Leucine Rich Repeat 286 305 IPR001611 GO:0005515
Psa3g1211 1017 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Psa3g1211 1017 Pfam Leucine rich repeat 167 224 IPR001611 GO:0005515
Psa3g1211 1017 Pfam Leucine rich repeat 526 585 IPR001611 GO:0005515
Psa3g1211 1017 Gene3D Ribonuclease Inhibitor 208 352 IPR032675 -
Psa3g1211 1017 SMART LRR_typ_2 548 571 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 188 212 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 476 499 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 501 524 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 332 356 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 92 116 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 428 452 IPR003591 -
Psa3g1211 1017 SMART LRR_typ_2 284 308 IPR003591 -
Psa3g1211 1017 SUPERFAMILY L domain-like 27 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1211 Psa-Chr3 110636423 110640116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1211 1 1017 Receptor kinase-like Gene Family AT1G08590 59.100 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa3g1211 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1211 - - gmx:100811284 1634.39