Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1203 ATGAAAGATCAAGAGAAAGGGAAAGGGCCAATGGATCTTCAAAACTCTGCTACTGAATTAAGAGCGCTTATTGTCGATGATGATAAGCTTGTTAGAATGATTCATCAAGGTCTATTGAAAAGAGCTGGTGTGAGAAATGAAGCAGTAAAGAATGGTAAAGAAGCCATAGATATTCATTGTAGTGGTCAAAGTTTTGATATTATTCTTATGGATAAGGATATGCCTATCATGAATGGGATTGAGGCAACCAAGAAACTGCGATCAATGGGTATTGAAAGCATGATTGTTGGTGCATCATCATGCTATAGAGAAGCAGAAAAACAAGAATTTATTGAGGCAGGGTTAAATGACTATCAAGTGAAACCATTGACCCTTGACGTGCTTAAGTCAATTCTTGATGCTGTAAAAGCTAGAAAGTAG 420 0.369 MKDQEKGKGPMDLQNSATELRALIVDDDKLVRMIHQGLLKRAGVRNEAVKNGKEAIDIHCSGQSFDIILMDKDMPIMNGIEATKKLRSMGIESMIVGASSCYREAEKQEFIEAGLNDYQVKPLTLDVLKSILDAVKARK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1203 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 137 - -
Psa3g1203 139 SUPERFAMILY CheY-like 19 137 IPR011006 -
Psa3g1203 139 CDD REC_hyHK_CKI1_RcsC-like 23 132 - -
Psa3g1203 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 137 - -
Psa3g1203 139 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Psa3g1203 139 Gene3D - 1 139 - -
Psa3g1203 139 SMART REC_2 20 132 IPR001789 GO:0000160
Psa3g1203 139 Pfam Response regulator receiver domain 23 132 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1203 Psa-Chr3 110309000 110310193 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1203 20 124 Response Regulator Gene Family AT3G04280 49.533 2.20e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa3g1203 Response_reg 5.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1203 - - cam:101506170 183.726