Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1200 ATGAAGAAACAAATGAAAAAGAGATCCGAAGTCATAACATTCACTGATTTTGATGCGGATCGTCAAGCGGGCCCTCCGATAGTAAGAGCCCTTGTTGTGGACAATGATGAGCACATTCGAAAGATTCATGTAGATATTTTGAAAACACTTGGTGTGGAAACTTGTTCAGTGGAAACTGGCCAAGAAGCCTTAGAAATAATTTCTTATGATCGGATCTATGACCTAATTCTGATTCGTAGGATTTTGCCTGTCATGGATGGACTTAAGGTGACGGAGATGCTGCGAAACATGGAGTACCCTACAACGATAATTGGGGTGACGCATCCGCTTACAGAATTAGAAAAGGAAGAATTTTATAGTGCAGGGGTAGATGGTTGCATTGATTATGAGATACCATTGAGAGCTAAAACGGTTGAAACACTGGTTGCAAATATTAATCATCCCCGACCCTGGAAGAAAAGAGTTGAGTATAATGCAGTTTACAATACTTTTTTCCGTCCTGATTCAAAGTTTCGTCCTGGCCAGCTTTATCATTCAAGTTCTGG 545 0.4055 MKKQMKKRSEVITFTDFDADRQAGPPIVRALVVDNDEHIRKIHVDILKTLGVETCSVETGQEALEIISYDRIYDLILIRRILPVMDGLKVTEMLRNMEYPTTIIGVTHPLTELEKEEFYSAGVDGCIDYEIPLRAKTVETLVANINHPRPWKKRVEYNAVYNTFFRPDSKFRPGQLYHSSS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1200 181 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 146 - -
Psa3g1200 181 ProSiteProfiles Response regulatory domain profile. 29 144 IPR001789 GO:0000160
Psa3g1200 181 Pfam Response regulator receiver domain 31 128 IPR001789 GO:0000160
Psa3g1200 181 SMART REC_2 28 145 IPR001789 GO:0000160
Psa3g1200 181 CDD REC_hyHK_CKI1_RcsC-like 31 127 - -
Psa3g1200 181 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 18 146 - -
Psa3g1200 181 Gene3D - 18 147 - -
Psa3g1200 181 SUPERFAMILY CheY-like 29 127 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1200 Psa-Chr3 110295607 110296807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1200 27 145 Response Regulator Gene Family AT3G04280 32.787 7.65e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa3g1200 Response_reg 3e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1200 - K11527 sind:105175773 84.7297