Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1199 ATGGTGGCTACAATTGAGGACAAAGGTAAACAAAAAATGGTATATGATAGTGAAGATGATGATCTTGCAAAACCCCCTCCAAGAATAGTAAGAGCACTTGTTGTGGAAAATGATGACCGCATTCGGAAGATTCATGAAAAAAAGTTGAAACAACTTGGTGTGGAAACTCGTTCAGTGAAAACCGGCCGAGAAGCTATAGAAAAAATTTGTGTTGATGAAATCTACGACTTAGTTCTCATTCGTAGGACTTTGCCTTTCATGGATGGACTTGAGGTGACGAAGATGCTGCGAAAAATGGAGTACCCTACAACGATTGCTGGTGTGTCGCAACCCCTTACAGATTTAGAAAAGATAGAATTTTATAGTGCAGGGCTAGATATTTGCATTGATAACGAGACACCCTTGACCCGTAGAACACTAGAATTCATTGTTAAAACTGTTTCTCCCCGCAAAACTTGGAAGCAAAGATCTGATTACCTATGTTTTCTCATTCACGGTCCTCCTTCTGGTCCTGGTTCAAGTTCTACTTCTAAAAACGTTTGTGAAGAAGATTAA 555 0.3964 MVATIEDKGKQKMVYDSEDDDLAKPPPRIVRALVVENDDRIRKIHEKKLKQLGVETRSVKTGREAIEKICVDEIYDLVLIRRTLPFMDGLEVTKMLRKMEYPTTIAGVSQPLTDLEKIEFYSAGLDICIDNETPLTRRTLEFIVKTVSPRKTWKQRSDYLCFLIHGPPSGPGSSSTSKNVCEED* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1199 184 ProSiteProfiles Response regulatory domain profile. 31 148 IPR001789 GO:0000160
Psa3g1199 184 Pfam Response regulator receiver domain 33 129 IPR001789 GO:0000160
Psa3g1199 184 Gene3D - 30 159 - -
Psa3g1199 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 149 - -
Psa3g1199 184 SUPERFAMILY CheY-like 31 129 IPR011006 -
Psa3g1199 184 SMART REC_2 30 144 IPR001789 GO:0000160
Psa3g1199 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 21 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1199 Psa-Chr3 110291619 110292976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1199 28 137 Response Regulator Gene Family AT3G04280 33.036 6.01e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa3g1199 Response_reg 4.4e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1199 - K07658 cit:102622226 73.559