Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1182 ATGAATACTGTCATGAATAATAGAACGGTTCACAATGATGACAAGCCTTTTCCTGGATGCTTGGGAAGAATGGTTAACCTTTTTGATTTGACTACTGCTACTACTGTCAATGGAAACAAGCTTCTCACCGACAAGCCACACCGTGATCATGCATCTCTTTCAAGAAGTCAATCGGATGTTTCGAGGATTGCAAGTCCTTCATTTGCTGATCAGATAGAAGATAGGCCGATTGTTTCTAACTTAATGAGAGCGTCTTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATGGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCATAATCCACCAAATGTTGTTGCAAAGTTAATGGGCCTCGAGGCCCTTCCACAGGGAAAACGGAATTTACCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCACATGTGTGGTCATTCTGGGACATCATTCAATCACCGGCAGTTGGATGATAGGTTTATGGACAAGGAAATGCTTCATGAAATTCATCCGAACAGAGAACAGGTTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGTAAATGACAAGACACCAGAGAGAGGGAAGTGGGCTGAAGATGTTAATGAGAAGAAAATGGCTTTCATTCGTCAAAAATTCATGGAAGCAAAACGACTCTCTACAGATGAGAGATTACGCCAATCAAAGGAGTTTGACGAAGCCTTGGAAGTTTTAAGCTCCAATAACGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTATATGAACGACAGTCTACTCCACTGGCTGAGACAAAGCGTATTACTGTTCTGAAACCTTCGAAGATGGTTGACAATGAAAAGTTCAGTAGAAAGGGAAACAATAGTGACAAACATATTAAGAAACCATTAAATAATGACGCTGCATGGGAGAGAAATAGTCCTGGATACTCTCCCGCCAGTCAGAAAGTTGAGGAATTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGTTCTGTAAGAGCACATGATATTAAGGCCTTGGTTTCTCCAATGTCATCATCACCTCAAAATCTGCAAAGTGGAAACTTCTATCACGACCCTGAAGATGATGATCTACTTGAATCAAGAAAAGTTGCAGAAGAAATTACACGGCAGATGCATGAAGATCTCGGAAGCTATCAAAGGGATGAAACCGTGTATTCTCCAGTATTTTCCACAGGATATATTGGCGATGATAGTTCATTCTACAAATCAGATCATGAGTGTACTGCAGGGAATTTTAGTGATTTGGAAGTTATGTCACCATCTCCCAGGCATTCTTGGGATTTCGTCAATCGCTGTGACAGTCCTTATTCTTCATCATCCTTCAGTCGTGCTTCGTGTTCTCCTGAATCTTCAGTAGGCCGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCTAAGAAGGATCTTCAAGAACAGAGGCATATGCGGAGAAGTTCTACATTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGATTGAAGGTATTAATGAAGAACCAGAACCGAGGGAATCTGTTTCTTGCAGTAAAAATTCCAATGATGAAGAAATATATGCGGATGGGTCTACTAAAAGCCTTCCCAGGTCAAAATCTGTTCCTGTATCTTCCAACGTCTATGAAAATGGGCTGTACATTGAAGCTTGTAATAACGATGCTGGTAAAGCACACGGCTCCAAGGAATTGACGAAGTCAAAGAGTATGAAGTCAACATTTAAAGGGAAAGTTGCGAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAAAAATCTTGTCTATCCCATTCTACAGACGAGTCTCAATCAACTATTGCAGAAACATCAGTATCTACGATAAACTCACCTGAAGTCTTTAGGAATGATGTGTCTCAAAGCTTCAATGGTGGGTCCTTTGAAGAGTGTTCCCTTCCAGCTCTATGTGAATCATCGAGCAAAGCTTTATCCAATCCTGTCTTTAGCAGACGAGGCGTAATATCTATGGAGCCTGAATCTACCACGTCAAAGTCCACGGTGACAGGGATTTCAAGTGAAAACCAGGACCAGCCAAGTCCAATCTCAGTTTTAGAGCCTCCCTTTGAAGATGAAAATGCAGCTCACGAGTCCTTGGACTGTATGAAGGGTGGTCTGCTGGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGAACCCTCTCATGGGATGGTCCTTGTACGGAGGTGGCAAGTCCGTACCCAATAAAATCTACATCGGTTTCCTTAGACACCAAGGTAGAGGATCAAGACCTGCTCGTCCTTGTTCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGAGCCATCATTGAGGGACAAGTATGCCAGTCTCTACGACAAGGAGGAGGTTCAGCCTCTTCATGAAGCAAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTTGTCTTCGATTGTGTCAATGTTGCACTAACAGAAGTTACTGGGTATGGATCAGAAAGTTCCTTAATTGGCAAGTTGTGGAGTGGGGACCACAGAAGGCTCCAATTATCAGAGGGTGCATCTCCATTTTTGGTAGACCTTATTGTAGCCCAAATGAAGGAGTTGACATCTAGTGGCATAGGGTCTGTTTGGGGGGATTGTGGGGACAGTAACAGCCTGGTGGTGGAAACTGTAGTGAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTAATGGGATTTGAGGTGGATATTTTGGTAAAGGTAGTAGAAGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGGGTGGTGTGA 2961 0.4238 MNTVMNNRTVHNDDKPFPGCLGRMVNLFDLTTATTVNGNKLLTDKPHRDHASLSRSQSDVSRIASPSFADQIEDRPIVSNLMRASSNKKINGTPIKMLMDQEMSKEVVSKHNPPNVVAKLMGLEALPQGKRNLPVERSPGGDCSQHMCGHSGTSFNHRQLDDRFMDKEMLHEIHPNREQVAYKDIYEIWLQSQRTSNVNDKTPERGKWAEDVNEKKMAFIRQKFMEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYERQSTPLAETKRITVLKPSKMVDNEKFSRKGNNSDKHIKKPLNNDAAWERNSPGYSPASQKVEEFPVQPTRIVVLKPSSVRAHDIKALVSPMSSSPQNLQSGNFYHDPEDDDLLESRKVAEEITRQMHEDLGSYQRDETVYSPVFSTGYIGDDSSFYKSDHECTAGNFSDLEVMSPSPRHSWDFVNRCDSPYSSSSFSRASCSPESSVGREAKKRLSERWAMMASKKDLQEQRHMRRSSTLGEMLALSDIKKSLISEIEGINEEPEPRESVSCSKNSNDEEIYADGSTKSLPRSKSVPVSSNVYENGLYIEACNNDAGKAHGSKELTKSKSMKSTFKGKVASFLFSRNKKSIREKSCLSHSTDESQSTIAETSVSTINSPEVFRNDVSQSFNGGSFEECSLPALCESSSKALSNPVFSRRGVISMEPESTTSKSTVTGISSENQDQPSPISVLEPPFEDENAAHESLDCMKGGLLGSRVSLKSNLIDKSPPIESIARTLSWDGPCTEVASPYPIKSTSVSLDTKVEDQDLLVLVQKLLSAAGLDDQVQSDSFYSRWHSLESPLEPSLRDKYASLYDKEEVQPLHEAKRRQRRSNQKLVFDCVNVALTEVTGYGSESSLIGKLWSGDHRRLQLSEGASPFLVDLIVAQMKELTSSGIGSVWGDCGDSNSLVVETVVRKEVVGKGWVELMGFEVDILVKVVEGKLLEELVEDAVVDLTGRVV* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1182 986 MobiDBLite consensus disorder prediction 41 64 - -
Psa3g1182 986 Pfam Protein of unknown function (DUF3741) 221 264 IPR022212 -
Psa3g1182 986 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 984 - -
Psa3g1182 986 MobiDBLite consensus disorder prediction 693 714 - -
Psa3g1182 986 MobiDBLite consensus disorder prediction 542 563 - -
Psa3g1182 986 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 984 - -
Psa3g1182 986 Pfam Domain of unknown function (DUF4378) 800 976 IPR025486 -
Psa3g1182 986 MobiDBLite consensus disorder prediction 525 563 - -
Psa3g1182 986 MobiDBLite consensus disorder prediction 525 541 - -
Psa3g1182 986 Pfam DUF761-associated sequence motif 113 130 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1182 Psa-Chr3 107601720 107607609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1182 5 982 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.844 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1182 - - gmx:100816611 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1182 3 107601720 107607609 Psa3g1182 3 107601720 107607609 ECH