Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1168 ATGGCCGGAAAAGGAGAGGGACCGGCTATCGGAATCGATCTCGGAACCACCTACTCCTGTGTAGGAGTATGGCAACATGATAGAGTTGAAATCATTGCCAACGACCAAGGTAACAGAACTACACCGTCTTATGTCGCTTTCACTGACTCCGAGCGTCTCATCGGTGATGCCGCTAAGAACCAGGTCGCCATGAATCCTATCAACACCGTCTTCGATGCAAAGAGGTTGATTGGTCGTAGAGTCTCTGATGCATCTGTTCAGAGTGACATGAAGTTGTGGCCTTTTAAGATCATTGCTGGTCCTGCTGAGAAGCCAATGATTGTTGTTAACTACAAGGGTGAAGATAAGCAATTTGCTGCTGAAGAGATCTCTTCAATGGTTCTGATGAAGATGCGTGAGATTGCTGAAGCTTACCTTGGCTCTGCAATTAAGAACGCCGTTGTCACTGTCCCTGCTTACTTTAATGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGCGAATCATCAATGAGCCCACTGCTGCTGCCATTGCATATGGGCTAGACAAGAAAGCAACAAGTGTTGGTGAAAAGAATGTCTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTTTGCTTACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCTGGAGACACGCCATCCTGGAGTGAGGATTTGATAACAGACATAATTCCAAAGGTTCAACAACTTTTGCAGGATTTCTTTAATGGAAAGGAGCTATGCAAAAGCATTAATCCTGATGAGGCTGTTGCATATGGAGCTGCTGTCCAGGCTGCAATTTTGAGTGGTGAGGGGAATGAGAAGGTGCAGGATCTTCTCCTTCTTGATGTTACCCCTCTCTCTCTTGGTTTGGAGACTGCTGGAGGTGTGATGACTGTTCTGATCCAAAGGAATACCACCATTCCAACAAAGAAAGAACAGGTTTTCTCAACCTATTCTGACAACCAGCCTGGTGTCTTGATCCAAGTCTTTGAAGGAGAGAGAACAAGGACTAGGGATAACAATTTGTTGGGCAAGTTTGAACTTTCTGGTATTCCTCCTGCTCCCAGAGGTGTTCCCCAAATTACCGTGTGCTTTGACATTGATGCCAATGGTATATTGAATGTCTCTGCTGAAGACAAGACTACCGGGCAGAAGAACAAGATCACCATCACAAATGACAAGGGTAGGCTTTCAAAGGATGATATTGAGAAGATGGTTCAGGAGGCTGAGAAATACATGACTACCGGGCAGAAGAACAAGATCACCATCACAAATGACAAGGGTAGGCTTTCAAAGGATGATATTGAGAAGATGGTTCAGGAGGCTGAGAAATACAAGTCTGAGGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAGAATGCATTAGAAAACTATGCATACAACATGAGGAACACCATTAAGGATGATAAGATTGCAGGTAAACTTGATCCAGCTGACAAAAAGAAGATCGAGGATGCCATTGAACAGGCTATCCAGTGGCTTGACAGCAACCAGCTTGCTGAGGCCGATGAATTTGAGGACAAGATGAAGGAACTTGAAGGCCTCTGCAACCCTATCATTGCCAAGATGTATCAAGGTGGTGCAGGTCCAGAGGGTGCTGCTCCAACTGATGAAGAATATGCTCCTTCTGGTGGAAGTGGTGCTGGTCCCAAGATTGAGGAAGTCGACTAA 1734 0.4516 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKIIAGPAEKPMIVVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTPSWSEDLITDIIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDDIEKMVQEAEKYMTTGQKNKITITNDKGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKLDPADKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELEGLCNPIIAKMYQGGAGPEGAAPTDEEYAPSGGSGAGPKIEEVD* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1168 577 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Psa3g1168 577 MobiDBLite consensus disorder prediction 548 577 - -
Psa3g1168 577 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 279 426 IPR029047 -
Psa3g1168 577 Gene3D - 467 577 IPR029048 -
Psa3g1168 577 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Psa3g1168 577 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 459 IPR029047 -
Psa3g1168 577 Gene3D - 192 232 - -
Psa3g1168 577 PANTHER HEAT SHOCK PROTEIN 70KDA 244 427 IPR013126 GO:0005524|GO:0140662
Psa3g1168 577 PANTHER HEAT SHOCK PROTEIN 70KDA 428 557 IPR013126 GO:0005524|GO:0140662
Psa3g1168 577 PANTHER HEAT SHOCK PROTEIN 70KDA 1 239 IPR013126 GO:0005524|GO:0140662
Psa3g1168 577 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g1168 577 Gene3D - 71 126 - -
Psa3g1168 577 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 428 557 - -
Psa3g1168 577 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 239 - -
Psa3g1168 577 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 244 427 - -
Psa3g1168 577 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 428 477 IPR029047 -
Psa3g1168 577 Gene3D - 244 264 - -
Psa3g1168 577 Coils Coil 449 469 - -
Psa3g1168 577 SUPERFAMILY Actin-like ATPase domain 197 281 IPR043129 -
Psa3g1168 577 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 287 427 IPR029047 -
Psa3g1168 577 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g1168 577 PRINTS 70kDa heat shock protein signature 36 48 - -
Psa3g1168 577 PRINTS 70kDa heat shock protein signature 58 66 - -
Psa3g1168 577 PRINTS 70kDa heat shock protein signature 146 166 - -
Psa3g1168 577 PRINTS 70kDa heat shock protein signature 209 219 - -
Psa3g1168 577 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 471 552 IPR029048 -
Psa3g1168 577 Pfam Hsp70 protein 9 234 IPR013126 GO:0005524|GO:0140662
Psa3g1168 577 Pfam Hsp70 protein 244 431 IPR013126 GO:0005524|GO:0140662
Psa3g1168 577 Gene3D - 265 278 - -
Psa3g1168 577 Gene3D - 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1168 Psa-Chr3 106333239 106336066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1168 244 577 Calmodulin-binding Proteins AT5G02490 80.473 1.40e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1168 K03283 - twl:120013089 525.783