Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1152 ATGACGTCATTCTTGAAGCCTGAGAATGCCCTCAAACGGGCAGAAGAGTTGATCAATGTGGGGCAGAAGCAGGATGCTCTTCAGACTCTGCACGACCTTATAACTTCAAAAAGATACCGAGCATGGCAGAAAACACTTGAGCGGATTATGTTTAAGTATGTAGAGCTGTGTGTAGACATGAGGAAAGGACGGTTTGCTAAGGACGGGCTTATTCAGTACCGTATCATATGTCAGCAAGTGAATGTTAGTTCACTTGAGGAGGTGATTAAGCATTTTATGCATTTGTCAACTGAGAAAGCTGAGCAAGCTCGTAGCCAGGCTCAGGCCTTAGAAGAGGCCCTTGATGTTGATGACTTGGAGGCGGATAAAAGGCCTGAGGACTTGATGCTGAGCTATGTCAGTGGTGAAAAGGGGAAGGATCGTTCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTTTGGGAAACTTACAGGACCGTGCTTGAGATATTGCGGAACAACTCTAAATTGGAAGCTTTATATGCTATGACAGCTCACCGAGCTTTCCAGTTTTGTAAGCAATATAAACGGACAACAGAGTTCAGAAGGCTTTGTGAAATCATTAGAAATCATTTGGCTAATCTTAACAAATATCGGGACCAACGAGACCGACCTGATCTTTCTGCTCCCGAAAGCTTGCAATTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGAGCTTGAACTCTGGCAGGAAGCCTTTAGATCTGTTGAAGATATACATGGGTTAATGTGCATGGTCAAGAAAACACCAAAACCATCATTGATGACGGTTTACTATGTTAAGTTGACTGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCTTGGTTCAAACTCTTTTTGTTACAAAAAAGCTTCAACAAAAATCTGAGTCAGAAGGATTTGCAGTTGATAGCTTCATCTGTTGTTCTAGCTGCACTTTCAGTTCCTCCTCATGATCGCACTCACGGTGCATCTCATTTAGAACTAGAGCATGAAAAGGAACGAAATTTGAGGATGGCTAACCTCATAGGCTTTAATCTCGAAACTAAGCCCGATAGCAGAGAAGTGCTCTCCAGGTCATCACTTCTTGCTGAACTGGCATCAAAGGGTGTAATGTCTTGTGTTTCACAAGAAGTGAAAGACATTTACTATCTTTTGGAACATGAATTTCTACCCTCTGATCTTGCATTAAAAGTACTACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTAAGTTTACCTTTGCTTCATCAGTTCCGGAGGTGCATTTTTCGCAGTATGTCCCAGCACTTGAGAAGTTAGCTACCTTGAGGTTGCTACAACAGGTGTCTAATGTGTACCAATCGATGAAGATTGAAAACTTAGCTGGGATGATTCCTTTCTTTGATTTTTCCGTTGTGGAAAAGATTTCCGTAGATGCCGTTAAGCAGAAGTTTCTGTCCATGAAAGTTGACCACATGAAAAATGTTGTAATTTTCTGCAAGACGAGTCTTGAGGCTGATGGCTTGAGGGATCACTTGGCAAGTTTTGCTGAGCAGTTGAACAAGGCACGGCAAATGATTTGTCCACCTGATGCGCAACGATCAAAACACGGAGGCTTGCTTCCGACTTTGCCAGAGGTTGTAGCCAAAGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATTGAGAAGAGGAAAGAGGAACAAGAAAGGCAGCTTCTTGAACAGGAACGTGAGGAGGAGTCTAAGAGACTAAGATTGCAGAAAATTACTGAAGAAGCAGAGCGAAAGCGGCTTGAAACTGAGGTTGAGCTGAGGAAAAAACAGAGACTCAAAATGGAAATGGAGGAGAAAGATAAAGAGGAAGCTCAGGCTATACTTCAGGAAGCTGAAAAGCGCTTTAAGAGAAAGGGTAAAAAGCCCATCATAGAAGGGGGTGTAATTTCTAAGAAAACCTTGGTGGAGTTGGCATTGATTGAACAACACCGGGAGAAGCAGGAAATGGAGAAGAAACTGCAGAAATTAGCTAAAACCATGGATTATTTGGAAAGAGCAAAGAGAGAAGAGGCTGCTCCACTTATTGAAGCTGCATATCAACAACGCTTAGTGGAAGAGAGGGTTCTTCATGAAAATGAGCAACAACAAGAGGTTGAACTGAGCGAACAGCGCCATGCTGGAGATCTCAAGGAGAAAGAAAGGCTTAGTCGAATGATGGGCCATAAAGAGATATATCAAGAGAGAGTTGTCAGTCATCGCCAAGCAGAATTTAACAGATTGAGGACAGAAAGCGAGGAGCGTATATCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGATAAAATGAGGAAGTTGAAGTATTATCTTATTGTTGAAGAAGAGAGACGGCAAAAATTGCGGGAGGAGGAAGAAGCTCAAAAGCGTGAAGAGGCTGAGAGAAAAAAGAAGGAACAGGCTGAACGCCAAGCAAAATTGGATGAGATGGCTGAAAAGATGAGGAAAAGGGAACAAGAAATTGCTGAAAAAATTGAGAGGGAAAAGAGGGAAGCATTGCTGGGTAGACCAACTGAACCAGCTATGAGGCCGTATGAGCCGCCTGCCCGTCCATTGGAGTCACGCCCTGCTGTTTCTGTAGCTTCAGCAACCCCAGCTCCTGGGAAATATGTTCCCAAGTTCCGGCGAGCAGGAGCTGAGACCACAGCTGCTGCTCCTCCAGAAGCAGACCGTTGGAGCAACAGTGGCAGCAGGCCAGATGGTGACAGGTGGGAACGTGGAACTTCCTTTGGTGGGGGTTCAAGGTCATCTTCATCATGGTCCTCTTCCAGGAATCCGCGTGATCGTCCATGA 2871 0.4368 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMTVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPDSREVLSRSSLLAELASKGVMSCVSQEVKDIYYLLEHEFLPSDLALKVLPLLNKISKLGGKFTFASSVPEVHFSQYVPALEKLATLRLLQQVSNVYQSMKIENLAGMIPFFDFSVVEKISVDAVKQKFLSMKVDHMKNVVIFCKTSLEADGLRDHLASFAEQLNKARQMICPPDAQRSKHGGLLPTLPEVVAKEHKRLLARKSIIEKRKEEQERQLLEQEREEESKRLRLQKITEEAERKRLETEVELRKKQRLKMEMEEKDKEEAQAILQEAEKRFKRKGKKPIIEGGVISKKTLVELALIEQHREKQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERVLHENEQQQEVELSEQRHAGDLKEKERLSRMMGHKEIYQERVVSHRQAEFNRLRTESEERISRILQSRRQERDKMRKLKYYLIVEEERRQKLREEEEAQKREEAERKKKEQAERQAKLDEMAEKMRKREQEIAEKIEREKREALLGRPTEPAMRPYEPPARPLESRPAVSVASATPAPGKYVPKFRRAGAETTAAAPPEADRWSNSGSRPDGDRWERGTSFGGGSRSSSSWSSSRNPRDRP* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1152 956 Pfam PCI domain 373 508 IPR000717 -
Psa3g1152 956 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Psa3g1152 956 Gene3D UVR domain 217 268 - -
Psa3g1152 956 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Psa3g1152 956 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 930 IPR027512 GO:0005852
Psa3g1152 956 SMART PINT_4 441 532 IPR000717 -
Psa3g1152 956 Coils Coil 797 857 - -
Psa3g1152 956 Gene3D - 269 342 - -
Psa3g1152 956 Gene3D - 353 507 - -
Psa3g1152 956 MobiDBLite consensus disorder prediction 805 956 - -
Psa3g1152 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 905 IPR027512 GO:0005852
Psa3g1152 956 Coils Coil 667 697 - -
Psa3g1152 956 MobiDBLite consensus disorder prediction 805 862 - -
Psa3g1152 956 MobiDBLite consensus disorder prediction 936 950 - -
Psa3g1152 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 905 - -
Psa3g1152 956 Coils Coil 93 120 - -
Psa3g1152 956 Coils Coil 561 649 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1152 1 950 Eukaryotic Initiation Factors Gene Family AT4G11420 71.069 0.0 1283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1152 K03254 - gmx:100782598 1434.47