Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1142 ATGGAATGTTGCAATCAAAAAAAGTTTGACAGAATGAAACCATTCATTGCTGTAGTATTCTTGCAATTTGGATATGCTGGTATGGATGTTTTGTCCAAAGCTGCACTCAACAAAGGGATGAGTAATTATGTACTCGTCGTTTATCGCCACGTGGTCGCCTTCGTCGTGATCGCTCCTTTTGCACTGATCTTGGAAAAGAAAGTTAGGCCAAAAATGACATTTTCAATCTTTATGAAGCTAGTGGCTCTCAGTACGCTAGAGCCGGTAATTGATCAGAATTTATATTTCTTGGGAATGAAGTATACAACGGCTACTTTCGCGGTCGCTATGTACAATATCCTCCCTGCCATAACCTTCGTCATGGCTTGTATTTTCAAACTTGAGAAGATAAAAATGAAAAGTGTACATAGTCAAGCAAAGGTGGTTGGAACATTAGCAACAGTTGCAGGTGCCATGGTTATGACATTGTTAAGAGGTCCAATACTTAATATTTTTGGAACACATGGAAACAGTGCTGAAATCCAACATAGTAGTGGAGCAAATCTTCAACATGCAATAAAGGGATCAATTATGATCACAATTGGTTGTTTTAGTTGTGCTGGTTTCATGATTCTTCAAACAATAACACTTGAAACATATCCTGCTGAGCTGTCACTTACAGCATGGATATGTTTATTGGGAACAGTTGAAGGTGGCATAGTAGCTCTGATTGTGGAAAGGAATGATTATTCTGTTTGGTCTTTGAATTGGGATACAAAATTGTTGGCTGCAGTTTATAGTGGTATAGTTTGTTCAGGAATGGCCTATTACATACAAGGAGCTGTTATGAGATATAGAGGTCCAGTTTTTGTAACCACTTTCAATCCTCTCTCTATGGTCATTGTAGCTATCATGAGCTCTATCCTTTTGGGCGAGAAAATATTCCTCGGAAGGGTGATCGGCGCGGTGGTGATTATTTTCGGATTGTATTTAGTGGTATGGGGTAAAAGCAAAGATTATGACACACCAAGTTCAATTATTAAAGATGAAGCATTACCAGTTAAGGGAAGTAAAGAGAGCAATGAGAAAGAGGAGGGTCCTAATCATGAAGTCATCACTAGCAGTAATTTTGTTGCAATAGATCGATATGAACAAGTGTGA 1140 0.386 MECCNQKKFDRMKPFIAVVFLQFGYAGMDVLSKAALNKGMSNYVLVVYRHVVAFVVIAPFALILEKKVRPKMTFSIFMKLVALSTLEPVIDQNLYFLGMKYTTATFAVAMYNILPAITFVMACIFKLEKIKMKSVHSQAKVVGTLATVAGAMVMTLLRGPILNIFGTHGNSAEIQHSSGANLQHAIKGSIMITIGCFSCAGFMILQTITLETYPAELSLTAWICLLGTVEGGIVALIVERNDYSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLSMVIVAIMSSILLGEKIFLGRVIGAVVIIFGLYLVVWGKSKDYDTPSSIIKDEALPVKGSKESNEKEEGPNHEVITSSNFVAIDRYEQV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1142 379 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Psa3g1142 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Psa3g1142 379 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Psa3g1142 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
Psa3g1142 379 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020|GO:0016021
Psa3g1142 379 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1142 Psa-Chr3 104556266 104558216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1142 2 369 Nodulin-like Gene Family AT2G37460 61.518 7.11e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1142 - - gmx:100806461 562.762