Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1123 ATGACTATATCATGCTGGAAACCAAGTGTAGAGGGTGATGATGGAGATGTGAAAGGGAAAGTGGATGGATTGCTATGGTATAAGGATTTGGGGAACCATCTTTATGGTGAGTTTTCAATGGCTGTAATTCAAGCTAATAGTTCATTGGAGGATCATAGCCAGCTTGAATCTGGACCGTTGAGTTCGGATTATTTGGGTCCTCAAGGAACCTTTGTAGGAGTTTATGATGGTCATGGTGGACCTGCAGCATCCAAGTTTGTCAATGAAAATCTATTCTCCAATTTCAAGAGTTTTGCAGCTGAAGAACAAGGCGTTTCGGAAAAGGTTATAAAGAGGGCATTTTCTGCAACAGAAGATGATTTTTTGTCTCTTGTGAAGAAGCAGTGGCTAACGAAACCACAGATAGCGTCTTCCGGTACATGTTGTTTGGCCGGGATAATTTGCTATGGCATGCTGTATGTTGCAAATGCAGGAGATTCGAGAGCCGTGTTAGGAAGAGTGAAGAAGGGAACGAAAGAAACGTTAGCTGTTCAGTTATCTGCAGAACATAATGTGAACATCGAAACGGAGAGAGACGATGTTAGATCAAAGCACCCTTATGATCCACAGATTGTGGTTATGAAACACTCGGTTTGGCGCGTGAAAGGCATCATACAGGTTTCAAGATCCATAGGCGATGCGTATCTGAAGAAAGCAGAATTTAACCGGGAGCCACTGGCACAAAAGTTTAGACTACCCGAAACCTTTTTCAAGCCGATTCTAAGTAGCGAACCGTCAATATCGATTCACAAAATCCAACCTGCAGATCAATTTCTCATCTTTGCTTCAGATGGTTTATGGGAGCATCTTAGCAACCAAGCAGCTGTCAATATAGTTAGCAATAATCCACGCAATGGAATCGCAAGGAGACTCGTGAAAGCAGCGCTTAAAGAAGCAGCTAAGAAAAGAGAGATAAGATTGTCAGATCTCCAGAAGATTGAACAAGGAGTGAGGAGACATTTCCATGACGATATTACAGTAATCGTTGTATATCTAAATCGTAAACTGATCGATAATAGCTCACTATGTAGTTCTCCTCTTTCAATCAAAGGTGGTAGGCATGTCAACTTTTAG 1113 0.4178 MTISCWKPSVEGDDGDVKGKVDGLLWYKDLGNHLYGEFSMAVIQANSSLEDHSQLESGPLSSDYLGPQGTFVGVYDGHGGPAASKFVNENLFSNFKSFAAEEQGVSEKVIKRAFSATEDDFLSLVKKQWLTKPQIASSGTCCLAGIICYGMLYVANAGDSRAVLGRVKKGTKETLAVQLSAEHNVNIETERDDVRSKHPYDPQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLAQKFRLPETFFKPILSSEPSISIHKIQPADQFLIFASDGLWEHLSNQAAVNIVSNNPRNGIARRLVKAALKEAAKKREIRLSDLQKIEQGVRRHFHDDITVIVVYLNRKLIDNSSLCSSPLSIKGGRHVNF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1123 370 Pfam Protein phosphatase 2C 68 314 IPR001932 -
Psa3g1123 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 366 - -
Psa3g1123 370 SUPERFAMILY PP2C-like 65 346 IPR036457 -
Psa3g1123 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 366 - -
Psa3g1123 370 Gene3D - 28 354 IPR036457 -
Psa3g1123 370 CDD PP2Cc 35 345 IPR001932 -
Psa3g1123 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Psa3g1123 370 SMART PP2C_4 31 343 IPR001932 -
Psa3g1123 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1123 Psa-Chr3 103750588 103753410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1123 1 365 PP2C-type Phosphatase Gene Family AT3G12620 67.935 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1123 K01102 - gmx:100815902 578.941