Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1118 ATGATTATTGACTCACCCATGCATGCAATGTCTTCCTTGCCACCCACGCCTCCTAAACCAGTCTCCCACCACGACATGCTTCCTTTCTTCAACCAATCTATGGAACTCGTTCCTAGTCCCCTCAAAACACGAACCCATCACTCTCCCACACTCGGTGAACTCCTCAAACGCGTTGAAGATGCTCAAAACGACAACAATAATGCTCAACCCCACCATGTTCTCCACCTTTCTTCCCCCTCTTCTTCCAACACTCTTCCACCACCTTTTTTCCTTTCTTTCACTAACTTGACTTACAGCGTCAAGCTCAACCGAAAGTTGAATTGCTTTTCTTCCAATCAAAATTCTCTTCCAACAGATCAGGAAACGGAAACCAAACCAAACGGGATTAAGATTCTTCTCAACAACATCTCCGGTGAAGCGAGGGACGGCGAAATCATGGCGGTTCTTGGCGCAAGCGGCTCCGGCAAGTCAACTCTCATCGACGCTCTCGCCGACAGGATTTCAAAAGATTCTCTCAAAGGTACTAAAACACTGAACGGCGACGTTTTGGAGTCGAGTCTCCAGAAGGTAATTTCAGCTTATGTTATGCAAGATGACCTTCTCTTCCCGATGCTCACCGTAGAAGAAACTCTAATGTTCTCGGCGGAATTCCGACTACCTCGCTCTCTCTCCAAATCAAAGAAAAAAGCTCGCGTCCAAGCACTCATTGATCAGCTCGGTCTACGCAACGCCGCGTCAACAGTCATAGGAGATGAAGGTCATCGCGGTGTCTCAGGCGGAGAACGCCGCCGTGTCTCGATCGGCACAGACATTATCCATGATCCGATCATTTTGTTCTTAGATGAACCAACCTCCGGACTTGACTCCACCAGCGCGTACATGGTGGTTAAGGTTCTGCAGCGAATTGCCCAAAGCGGCAGCATCGTCATGATGTCCGTTCATCAACCAAGCTACAGAATCCTTGGCTTGTTAGACCGTTTGATCTTCCTCTCTCACGGCCAAACCGTGTACAGCGGTTCTCCGGCAAGCCTCCCTAATTTTTTCTCAGAGTTCGGTCATCCTATACCGGAAAACGAAAACCGTACGGAATTCGCACTGGACCTAATCCGCGAGCTTGAAGAAACTCCGGGAGGAACCAAAGGTCTTGTGGAGTTCAACAAAACATGGCAGTTAAAAAACCAACCTCTCACAGTTAACGTCGTTAATAATGGACCTAAACTGTCGTTAAAAGACGCCATCAGCGCGAGTATCTCAAGAGGGAAATTAGTCTCAGGAACTAACGGCGGAAACGTAAACGGAAACTCAACCGCTTCAGTTGCCACGTTTGCAAATCCGTTTTGGATCGAAATGGCGGTTATTGGAAAACGTTCTCTAACAAACTCACGTCGGATGCCGGAATTATTCGGAATCCGATTGGGTGCAGTTCTGGTCACCGGAGGAATCTTAGCCACCATCTTTTACCATCTAGACGATTCTCCAAAAGGTGTTCAAGAGCGTTTGGGTTTCTTCGCCTTCGCCATGTCAACAACCTTCTACACATGCGCAGAAGCCATTCCCGTTTTCCTCCAAGAGCGTTACATCTTCATGAGAGAAACAGCTTATAACGCTTACCGTCGTTCCTCTTACGTCCTCGCTCACTCCATCATCTCCCTCCCCGCACTCGTCTTCCTCTCCTTCACCTTCGCCGTCACAACTTTCTGGTCAGTCGGACTCGCCGGCGGGACATCTGGTTTTTTGTTCTACTTTTTAACCATTTTAGCTTCTTTCTGGGCAGGGAGTTCCTTCGTGACGTTCCTCTCCGGTATAGTCTCCCATGTGATGCTTGGCTTCACCGTGGTGGTTGCGATAATGGCTTACTTTCTTCTCTTCAGCGGATTCTTCATCAGCAGAGACAGAATTCCACCTTACTGGATATGGTTCCATTACCTCTCACTAGTGAAGTACCCTTTTGAAGGAGTGCTTCAGAATGAGTTTGATATCAAGCCACCAAGATGTTTCGTGAGAGGGATTCAGATGTTCGATAACACGCCGCTCGGGGATGTGCCGGGGAGTTTGAAGGTGGAGCTGCTGAAGAGCATGAGCAGGACGCTTGGGATTAACATAACAAGCTCCACTTGTGTTGTTACAGGAGAAGATGTACTGAAGCAGCAGGGGATCACGCAGCTTAGTAAATGGAACTGCTTGTTCATCACCATTGCTTGGGGTTTCTTCTTTCGCTTCCTCTTTTACTTGGCGTTGCTTTTTGGAAGCAAGAACAAGAGGAAATAA 2268 0.4806 MIIDSPMHAMSSLPPTPPKPVSHHDMLPFFNQSMELVPSPLKTRTHHSPTLGELLKRVEDAQNDNNNAQPHHVLHLSSPSSSNTLPPPFFLSFTNLTYSVKLNRKLNCFSSNQNSLPTDQETETKPNGIKILLNNISGEARDGEIMAVLGASGSGKSTLIDALADRISKDSLKGTKTLNGDVLESSLQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVMMSVHQPSYRILGLLDRLIFLSHGQTVYSGSPASLPNFFSEFGHPIPENENRTEFALDLIRELEETPGGTKGLVEFNKTWQLKNQPLTVNVVNNGPKLSLKDAISASISRGKLVSGTNGGNVNGNSTASVATFANPFWIEMAVIGKRSLTNSRRMPELFGIRLGAVLVTGGILATIFYHLDDSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALVFLSFTFAVTTFWSVGLAGGTSGFLFYFLTILASFWAGSSFVTFLSGIVSHVMLGFTVVVAIMAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPFEGVLQNEFDIKPPRCFVRGIQMFDNTPLGDVPGSLKVELLKSMSRTLGINITSSTCVVTGEDVLKQQGITQLSKWNCLFITIAWGFFFRFLFYLALLFGSKNKRK* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1118 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 350 IPR027417 -
Psa3g1118 755 Pfam ABC-2 type transporter 314 391 IPR043926 GO:0140359
Psa3g1118 755 ProSitePatterns ABC transporters family signature. 257 271 IPR017871 GO:0005524
Psa3g1118 755 Gene3D - 122 349 IPR027417 -
Psa3g1118 755 Pfam ABC-2 type transporter 452 658 IPR013525 GO:0016020|GO:0140359
Psa3g1118 755 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 48 748 - -
Psa3g1118 755 Pfam ABC transporter 133 285 IPR003439 GO:0005524
Psa3g1118 755 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 48 748 - -
Psa3g1118 755 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 116 357 IPR003439 GO:0005524
Psa3g1118 755 SMART AAA_5 142 357 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1118 Psa-Chr3 103365610 103368386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1118 132 317 Calmodulin-binding Proteins AT2G36910 28.571 1.35e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1118 K05681 - gmx:100781319 1129.39