Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1081 ATGGATGTTGACGAAGTAGAAAGAGTAGTTGTTGCAAAACCAGTTGCTTCAAGGCCAAATTGTTCTACTTTCAAATCTTTCTCAGAGCTTCTAGCAGGTGCTATCAATGCCGCTCCTCCAATTGCATCTTCTTCTCAAACTACAACTTCTGCAATTAGACCAAAGACAGTCAGGTTCAAGCCAACATTGAATCTCCCCCCTTCTCAGGCTGATGTTTTTAGAGGTGAACTTAGCAATTCTTCTGACATGGATCCTAAACCTGACACCAATCAGTCTCTCATATACAAGCCAATGGCGAAATTTGTGTCACAGACTACTGTCTCTCTCTTGGCAAACATGGGAATCTGTAGCACTAGCCAGCTACAACCACAGCAATCAATGGAGGCCAATCTACAGAATCTAAACCATGACAAATTTAGATCTAACAAAAGCTCAAATTTTCATCAGAACATTACTACCCTACCTACAGAAACACACCAGGCCACTGAACCTTGTAAGACGGCGCAACAGAACATGGAGGAAGACCAAAAAGCTTTAACATCATCCACAGCGAATACGGATAAACCTTCATATGATGGATATAACTGGAGAAAATACGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGCACACATCCTAACTGTCCAGTTAAGAAGAAAGTTGAAAGATCATTTGATGGCGAGATTGCTGAAATTGTTTACAAAGGCGAACACTGCCATGGAAAGCCGCAACTTCTAAAGCGCAATGCGGGAGCGACACAAGGACCGGGAATGGTTTCTGACGGAATGGTTCAAGATACATTGTGGAGTAATAATAATAATAATCAGAATGAAGGAAGAATAGAGAATCATGTCAAAGCTTCACATCCTAATGATCCTACTTATGAAAATTCTTTTGGTTTAAGTGGGGATTGTGAGGAAGGAAGCAAAGGATTTGAGGCAGATGAAGATGATCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCGAACGAAGCGGCAGTATCAGAAGAAGGTCTAGTAGAGCCACGGATCGTGATGCAAAATTCTGCGGATTCTGAAATCCTTGGAGACGGCTTTCGCTGGAGGAAATACGGACAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTCATATAAAGTGCAATGTTCGCAAGCACGTCGAGAGAGCAATCGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAGCACAACCATGAGATACCACTCAAGAACACAACAACTGTGGCATCATCCGAAAAGGATTCTCTTAGTAAAGATAAACCATATTGA 1332 0.4122 MDVDEVERVVVAKPVASRPNCSTFKSFSELLAGAINAAPPIASSSQTTTSAIRPKTVRFKPTLNLPPSQADVFRGELSNSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTSQLQPQQSMEANLQNLNHDKFRSNKSSNFHQNITTLPTETHQATEPCKTAQQNMEEDQKALTSSTANTDKPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHCHGKPQLLKRNAGATQGPGMVSDGMVQDTLWSNNNNNQNEGRIENHVKASHPNDPTYENSFGLSGDCEEGSKGFEADEDDPRSKRRKNENQSNEAAVSEEGLVEPRIVMQNSADSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTHIKCNVRKHVERAIDDPKSFVTTYEGKHNHEIPLKNTTTVASSEKDSLSKDKPY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1081 443 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 428 IPR044810 GO:0003700
Psa3g1081 443 MobiDBLite consensus disorder prediction 312 347 - -
Psa3g1081 443 MobiDBLite consensus disorder prediction 423 443 - -
Psa3g1081 443 PANTHER OS12G0507300 PROTEIN 18 428 - -
Psa3g1081 443 SUPERFAMILY WRKY DNA-binding domain 357 422 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 ProSiteProfiles WRKY domain profile. 192 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 ProSiteProfiles WRKY domain profile. 357 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 SMART WRKY_cls 190 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 SMART WRKY_cls 362 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 Pfam WRKY DNA -binding domain 364 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 Pfam WRKY DNA -binding domain 192 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 Gene3D WRKY domain 174 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 Gene3D WRKY domain 347 423 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 SUPERFAMILY WRKY DNA-binding domain 187 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g1081 443 MobiDBLite consensus disorder prediction 319 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1081 Psa-Chr3 101944653 101948615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1081 84 423 WRKY Transcription Factor Family AT2G37260 44.865 9.23e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g1081 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1081 - - gmx:100794069 628.246