Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1072 ATGGAGAGTTCTGTACTCTTCTTCTTCCTCTTCTTCATGCCTTCACTCTTTCATCTTCTCCCTTTTTCATCTTCTCAGATCATGCAAGGTTTTATAAGTTTGGACTGTGGAGGTGCAGAAAGTTTCACTGATGAAATTGGTCTTGACTGGACTCCTGATAATAAGCTTACAGATGGAGAAATAGCCACTATATCTGTTGCAAACGAGACGCGAAAGCAATACACGACATTACGATATTTTCCTGCTGATTCCAGGAAATATTGCTACACTCTTGATGTTATCGGTAGGACAAGGTATTTGTTAAGAGCAACTTTCTTGTATGGAAATTTTGACAAAAACAATGTTTATCCTAAATTTGATATTTCTGTTGGAGCTACGCATTGGTCTACTATTGTTATATCGGATGCTAATAGTATAGAAATGAGAGAGCTTATATTTTTGGCTTCGAGTTCAACTGTGAGTGTATGTTTATCAAATGCAACAACTGGACAGCCGTTTCTGTCTACTCTTGAACTTCGACAATTCAACGGTTCAATTTATTTTACCGAATTTGAGAAACAATTTTACCTAAGTGTCTCTGCAAGGATCAATTTTGGTGCAGAGAGTGATGCTCCAATCAGGTACCCTGATGATCCTTTTGATAGAATTTGGATGTCGGATTCTGTTAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACCAATGTACCGGTTTTTGTTAACCGAGATGAAATACCACCAATGAAAGTGATGCAGACAGCAGTAGTGGGTACAAATGGATCTCTAACTTACCGGTTGAATTTGGATGGTTTTCCTGCCACTGCTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGCGTCCAACTGAGTCTAGAAAGTTCAGGCTTGTGCTTCCAGACCAGCCTGAGATTAGCAAGATCATTGTAAATATTGATGAAAATGCTCTTGGGAAATATCGCCTTTATGAACCGGGATTTGTCAATCTAACCCTACCTTTTGTGCTTTCTTTTAAATTCGGCAAGACCTCCGATTCGTCCAAGGGGCCTCTTCTTAATGCCATGGAGATAAATAAGTATCTTGAGAAAAATAATGGTTCACCGGATGTTGAAGCTATTTCCGGAGTGCTTTCTCGCTACTCTTCAGCAAACTGGACACAAGAAGGAGGTGATCCATGTCTTCCCGTTTCCTGGTCATGGATCCACTGTAGCTCAGATCCACAACCAAGAATAATTTCAATCTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAATTGGTTGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGCCCAATACCCGATTTTACTGGGTGCATGGACTTAAAGATCATCCATCTTGAAAATAATCAGTTCACCGGTGTGCTCCCAGCCTCTTTGGTGAACCTTCCTAGTTTGAGAGAACTATATGTTCAAAATAATATGTTATCTGGAGCAGTACCGCCAGAGCTTCTAAGCAAGAATTTAGTTTTAAATTACTCCGGAAACATTAACCTTCATAGAGGAAGCAATACAAAGAGCCACATATATATTATTATTGGTTCAGCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGGTTATGCATAAAGGCAAGAAAAAATATTATGAGAAAGACCACATAGTTTCTGTCCCTACTCAAAGGCCGGCTTCTTGGAAGAGTGATGATCCTGCAGAATCGGCTCACTGCTTCAGCTTAGCTGAAATTGAAAGTGCTACAAACAACTTTGAGAGAAGAATCGGTTCTGGTGGTTTTGGAATTGTATACTATGGAAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTTAGGAATAATTCCTATCAAGGCAAGCGCGAGTTCTCCAATGAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGTCGAGAAGAAGATAATAGTATTCTTGTGTACGAGTTCATGCATAATGGCACACTCAAGGAACATCTCTATGGCCCTTTAGTGCACGGACAGAGTATTAATTGGATCAAACGCCTTGAGATTGCAGAAGACTCTGCCAAAGGAATTGAATACCTTCATACAGGTTGTGTTCCTGTAGTTATTCATAGAGACTTGAAAAGTAGCAATATTCTTCTTGATACACACATGAGAGCCAAGGTTTCAGATTTCGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGCGGGACAGTGGGATACCTGGATCCTGAGTACTACATTTCCCAACAGCTAACTGACAAGAGTGATGTTTATAGCTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGTTTTGGCATTCATTGCAGAAACATAGTCCAATGGGCAAAATTGCACATTGAGAGTGGAGATATACAAGGCATTATTGATCCCTTGCTAGGTAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGAGATATGCGTCCGTCAATCTCGGAAGTTTTAAAGGAGATCCAAGATGCAATATCTATTGAGAGAGAAGCTGAAACATTAAGAGAATGCAATTCTGATGAGGTTTCAAGAAATTCTTTTCATTCTTCCATGAACATAGGTTCAATGGATCTTGGTAGAGTTGAGAGTTTCCTTTCAATTGATGAAACCATTGCGCAACCAACGGCAAGATAG 2790 0.3939 MESSVLFFFLFFMPSLFHLLPFSSSQIMQGFISLDCGGAESFTDEIGLDWTPDNKLTDGEIATISVANETRKQYTTLRYFPADSRKYCYTLDVIGRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDANSIEMRELIFLASSSTVSVCLSNATTGQPFLSTLELRQFNGSIYFTEFEKQFYLSVSARINFGAESDAPIRYPDDPFDRIWMSDSVKKANYLVDVAAGTEKISTNVPVFVNRDEIPPMKVMQTAVVGTNGSLTYRLNLDGFPATAWAVTYFAEIEDLRPTESRKFRLVLPDQPEISKIIVNIDENALGKYRLYEPGFVNLTLPFVLSFKFGKTSDSSKGPLLNAMEINKYLEKNNGSPDVEAISGVLSRYSSANWTQEGGDPCLPVSWSWIHCSSDPQPRIISILLSSKNLTGNIPSDITKLVGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQFTGVLPASLVNLPSLRELYVQNNMLSGAVPPELLSKNLVLNYSGNINLHRGSNTKSHIYIIIGSAVGASVLLLATVISCLVMHKGKKKYYEKDHIVSVPTQRPASWKSDDPAESAHCFSLAEIESATNNFERRIGSGGFGIVYYGKLKEGKEIAVKVLRNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDNSILVYEFMHNGTLKEHLYGPLVHGQSINWIKRLEIAEDSAKGIEYLHTGCVPVVIHRDLKSSNILLDTHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGIHCRNIVQWAKLHIESGDIQGIIDPLLGNNYDLQSMWKIAEKALMCVQPHGDMRPSISEVLKEIQDAISIEREAETLRECNSDEVSRNSFHSSMNIGSMDLGRVESFLSIDETIAQPTAR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1072 929 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 929 - -
Psa3g1072 929 SMART serkin_6 601 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1072 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Psa3g1072 929 PANTHER OS07G0107800 PROTEIN-RELATED 13 929 - -
Psa3g1072 929 Pfam Protein tyrosine and serine/threonine kinase 603 803 IPR001245 GO:0004672|GO:0006468
Psa3g1072 929 CDD STKc_IRAK 607 874 - -
Psa3g1072 929 SUPERFAMILY L domain-like 401 518 - -
Psa3g1072 929 SUPERFAMILY Protein kinase-like (PK-like) 586 874 IPR011009 -
Psa3g1072 929 Pfam Malectin-like domain 34 364 IPR024788 -
Psa3g1072 929 ProSiteProfiles Protein kinase domain profile. 601 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1072 929 Gene3D Phosphorylase Kinase; domain 1 575 676 - -
Psa3g1072 929 Gene3D Transferase(Phosphotransferase) domain 1 677 898 - -
Psa3g1072 929 Gene3D Ribonuclease Inhibitor 377 530 IPR032675 -
Psa3g1072 929 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1072 Psa-Chr3 101233608 101239610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1072 23 711 Receptor kinase-like Gene Family AT2G37050 67.098 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa3g1072 Malectin_like 1.2e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1072 - - gmx:100784017 1608.58