Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1066 ATGGCGGTTCCTCTTCTAACCAAGAAGATTATCAAGAAGCGTGTCAAGAGGTTCATTAGGCCTCAAAGTGACAGGAGAATATGTGTCAAGGAAAGTTGGCGCAGGCCAAAGGGTATTGACTCACGTGTTAGGAGAAAGTTCAAAGGAGTTACTTTGATGCCAAACATTGGGTATGGTTCCGACAAGAAGACCCGCCACTATCTGCCTAACGGTTTCAAGAAGTTTCTTGTCCACAATGTCAAAGATCTAGAACTTCTGATGATGCATAACAGAACATACTGTGCTGAGATAGCACACAATGTGTCAACCAGGAAAAGAAAGGATATTGTTGAACGTGCAGCTCAATTGGATGTTGTTGTCACAAACAAATTGGCTAGGTTGCGCAGCCAAGAGGACGAATGA 402 0.4353 MAVPLLTKKIIKKRVKRFIRPQSDRRICVKESWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVVTNKLARLRSQEDE* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1066 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 133 - -
Psa3g1066 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Psa3g1066 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Psa3g1066 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Psa3g1066 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Psa3g1066 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1066 Psa-Chr3 101032052 101033800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1066 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 88.722 1.16e-88 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1066 K02912 - aof:109837658 245.358