Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1042 ATGATTTATTTTGGATGTTTCTGCTTCAGTACAGATTATTTCCTTTTCGTGAAGAAAGCTCTCAGCCCTGATTCAAAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAACTGCAGACTTCGGACCCTTCCGTAGAAGATACGGCACCGCCGCTTCCTCCACCGGAAGATGTTAAATTACCTGATATTGAAAACCAAAACAATCACTATCATGTTCCTGAAATTACAACTGCCGTGGTTAGTCAGGAACCCGGTCCTTCTGTTCCGGCACCAGTTGTTAGGAATGAAGTTTCCGTGGTTGCTCGTTATGCTGGTAAACCAAAAGATGAAGTGGCGGCAATCAAGATTCAAACAGCTTTTCGTGGATACTTGGCACGAAGAGCGTTGCGGGCTTTAAGAGGGTTGGTCAGATTGAAAACATTGATGGAAGGGCCGATTGTAAAACGCCAAGCCATGAGTACGCTCCGCTCAATGCAGACGTTAGCTCGTGTGCAATCTCAGATTCGTTCCAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTTTGCAAAGACAGCTCTTACAAAAGCATGTAAGAGAGCTCGAGACCCTGCGGATTGGAGAAGAATGGGATGATAGCCTACAATCAAAAGAACAAATTGAAGCCAAATTAATGAGCAAGTACGAGGCTACTATGAGAAGAGAAAGAGCAATGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAGCTCGTCTAGACCTATGAATCCAATGTTCGTGGATCCAACCAATCCTACGTGGGGCTGGAGCTGGCTTGAACGATGGATGGCTGCGCGGCCTTGGGAGAGCCGTGGCCTAATGGATAAAGAACTGAATGACCATTCATCTGTTAAAAGTTCGAGTCGCAGTATTACAGGTGGAGAAATCAGCAAATCATTTGCCCGTTTCCAGCTGAATTCCGAAATACATTCTCCCGCAGCCAGCCAAATTCCAGGCTCGCCGAGCTTTCAGTCAAATTCAACAACACCTAAGCCAGCTTCTGCAGCAGTTGCGAGGAAACTGAAGAAGGCAAGTCCAAAGGGAAGCTGGGTTATGGAAGAAGACTCCAAAAGCATGGCCAGCGTACAGTCAGATCGGTTCCGTAGACACTCTATCGCCGGATCATCAGTTAGGGATGACGAGAGTCTTGCTAGCTCTCCATCAGTTCCGAGCTATATGGTGCCGACTCAATCTGCGAAAGCTAGGTCTAGGACACAAAGTCAGAGTCCATTAGCTAAAGAAAACGGCAAACAAGAGAAGGGGTCCTTTGGGACCGCAAAGAAGCGTCTTTCTTTCCCGGCTTCTCCCGCCAGGCCAAGGCGTCATTCAGGTCCACCAAAGGTAGAAATCGCCGTAAATGCAGAGGTCAGTGTGGACAATGGTGTGGCCAGTTGA 1422 0.4719 MIYFGCFCFSTDYFLFVKKALSPDSKKSSKSKKKWFGKQKLQTSDPSVEDTAPPLPPPEDVKLPDIENQNNHYHVPEITTAVVSQEPGPSVPAPVVRNEVSVVARYAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPIVKRQAMSTLRSMQTLARVQSQIRSRRVRMLEENQALQRQLLQKHVRELETLRIGEEWDDSLQSKEQIEAKLMSKYEATMRRERAMAYAFTHQQNGKSSSRPMNPMFVDPTNPTWGWSWLERWMAARPWESRGLMDKELNDHSSVKSSSRSITGGEISKSFARFQLNSEIHSPAASQIPGSPSFQSNSTTPKPASAAVARKLKKASPKGSWVMEEDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARSRTQSQSPLAKENGKQEKGSFGTAKKRLSFPASPARPRRHSGPPKVEIAVNAEVSVDNGVAS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1042 473 MobiDBLite consensus disorder prediction 323 473 - -
Psa3g1042 473 SMART iq_5 111 133 IPR000048 GO:0005515
Psa3g1042 473 MobiDBLite consensus disorder prediction 23 59 - -
Psa3g1042 473 PANTHER IQ-DOMAIN 5-RELATED 11 469 - -
Psa3g1042 473 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 11 469 - -
Psa3g1042 473 Pfam Protein of unknown function (DUF4005) 388 452 IPR025064 -
Psa3g1042 473 MobiDBLite consensus disorder prediction 323 342 - -
Psa3g1042 473 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Psa3g1042 473 MobiDBLite consensus disorder prediction 387 424 - -
Psa3g1042 473 Gene3D - 95 138 - -
Psa3g1042 473 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1042 Psa-Chr3 98745889 98748411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1042 13 473 IQD Protein Family AT5G03040 50.625 2.43e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1042 - - gmx:100800080 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1042 3 98745889 98748411 Psa3g1042 3 98745889 98748411 ECH