Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0994 ATGAAAACTCACATGCAATTGTCCCCACGTTTAATACTTATCCACCCGATCTATACTATTAATCATAATTTCATATACAAGTCACTATATATATTCCTGTTTTGCATGGAACTTTTTTATAGTTATAATTATTATATCTTCCTTTTCATTCGTCTTATAATTAACATGGGAAAATCAAGTACTAGTTTTTCTAAGGGATTTTGGAAAGAAGGGTTTGGAATAATAATGAAGAAACTGCAGAAAAGAATAATGATGAAGCAAGGTCATTTTGTGGTGATTGCAACTCAAGGATGGAAGCCAGAAAGATTCTGTGTTGAGTTGGAATATTTAGATCATCCTGAGTTTGTGAAACTGTTAAAGCAAGCTGAAGAAGAGTTTGGATTCTCTCAAGACGGAGCAATTGCAATACCTTGTGAACCTGATGAGTTGAAGAGAATCATTGGAAGGAAAAAACAACACATAAACATCAAGGGTATTGATATTACTTGCTAG 492 0.3313 MKTHMQLSPRLILIHPIYTINHNFIYKSLYIFLFCMELFYSYNYYIFLFIRLIINMGKSSTSFSKGFWKEGFGIIMKKLQKRIMMKQGHFVVIATQGWKPERFCVELEYLDHPEFVKLLKQAEEEFGFSQDGAIAIPCEPDELKRIIGRKKQHINIKGIDITC* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0994 163 Pfam Auxin responsive protein 84 147 IPR003676 GO:0009733
Psa3g0994 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 73 163 IPR003676 GO:0009733
Psa3g0994 163 PANTHER SMALL AUXIN-UP RNA-RELATED 73 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0994 Psa-Chr3 94354228 94355412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0994 88 139 Calmodulin-binding Proteins AT4G34750 44.231 4.75e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0994 - K14488 gmx:100816753 143.665