Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0991 ATGTCAAAAGAATCTGAAGAGATTAAAACTATAGAGCAATGGAAATGGTCTGAAATGCAAGGACTTGAGCTTGTGAGTGATGATATGAATTCTTCTGACCCTTTTAAAGGGAACCTACCAACAGTAACAGAAGAAGGTGTTACTGTTACTGTTAGTGGTTCTGAGAATCGAGTTCAAGTTTCAAAGGAAATGGAAGAAACTAACAAAGATGATGATTGTGGTGGTAAGGAGAAGAAGAGTCAGAGTGTTGCTTCTGTTGGGTTTGGAGAGCTTTTTAGATTTGCTGATGGGTTGGATTATGTACTCATGACAATTGGGACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTATTTTTCTTAGATTCTTTGCGGATCTTGTTAACTCTTTTGGGTCAAATGCTAATAATTTGGACAAGATGACACAAGAAGTTGTCAAGTATGCGTTTTACTTCCTTGTGGTGGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCGTGTTGGATGTGGACCGGAGAGCGACAGTCAACCAAGATGAGGATCAAGTATCTCGAAGCTGCGTTGAAACAAGACATTGAATTCTTCGACACCGAGGTTCGAACTTCGGACGTTGTTTTTGCAATCAATACTGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGTTGGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACCGCTGTTTGGCAATTGGCTTTGGTTACTCTTGCTGTTGTTCCTATGATAGCCGTAATCGGAGGTATTCATACCACAACTTTGGCGAAGCTCTCTAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATCGTAGAACAGACGGTTGTGCAAATTCGAGTAGTGCTGGCATTTGTTGGCGAGTCTCGAGCACTACAAGGCTACTCATCATCCTTGAAGGTTGCTCAGAAGCTTGGCTACAAAACTGGTCTTGCAAAGGGAATGGGATTAGGTGCGACTTACTTTGTTGTTTTCTGCTGTTACGCGCTTCTTCTATGGTACGGAGGCTATCTTATACGGCATCACGAAACCAACGGAGGACTTGCCATTGCAACCATGTTTGCTGTCATGATTGGTGGAATAGGTCTGGGACAATCTGCGCCTAGCATGGCTGCATTTACGAAGGCGAGGGTTGCAGCTGCTAAGATTTTCCGGATAATTGATCACAAGCCTGGAATTGACAGAAACAGCGAATCAGGATTGGAATTGGAGATAGTTACTGGACTTGTGGAGCTGAAAAATGTCGACTTTTCTTATCCCTCTAGGCCCGAGGTTAAAATCCTCAATGACTTCTCCTTGAATGTTCCTGCCGGAAAAACCATAGCTTTAGTCGGTAGCAGTGGCTCTGGCAAGAGTACTGTTGTTTCTCTTATTGAGAGATTCTACGACCCAACTTCAGGACAAGTTATGCTAGATGGACAAGACATTAAAACTTTGAAGCTTAAATGGCTGAGACAACAGATAGGACTTGTGAGTCAAGAGCCTGCTTTGTTCGCTACCACGATTCGAGAAAATATACTCTTGGGAAGACCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCGTAAAACTTCCCGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGACTGCAACTTTCCGGAGGGCAAAAACAAAGAATAGCGATTGCAAGGGCAATGCTAAAGAATCCAGCGATTCTTCTTCTTGACGAAGCAACAAGTGCGTTGGACTCTGAATCAGAAAAGCTGGTGCAAGAAGCACTTGACCGGTTTATGATTGGCAGAACAACTCTTGTAATTGCGCATCGTCTCTCCACAATTCGCAAAGCTGACCTCGTAGCTGTGATTCAACAAGGAAGTGTTTTTGAAATTGGAACTCATGACGAGCTCTTCTCCAAAGGTGAAAATGGAGTTTATGCCAAGCTCATTAAGATGCAGGAGATTGCTCATGAAACTGCTATGAATAACGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCGCCGATAATTACTAGGAATTCTTCTTATGGACGATCACCGTACTCACGTAGATTGTCTGATTTCTCTACATCAGATTTCAGTTTGTCCCTAGATGCATCTCATCCAAATTACAAGCACGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCGTTCTGGAGACTAGTTAAAATGAACTCTCCTGAATGGCTTTACGCTTTAATTGGCTCAATCGGTTCAATTGTTTGTGGATCACTTAGTGCTTTTTTTGCTTATGTTCTTAGTGCTGTTCTCAGTATCTATTACAATCCGGACCACAGATACATGATCCGAGAAATAAATAAGTACTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTCAACACATTGCAACACTTCTTCTGGGATATTGTTGGCGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGGCGGCCGTGCTTAAGAATGAAATGGCCTGGTTTGATCAGGAGGAAAATGAAAGTGCAAGGATTGCTGCAAGGCTAGCTCTTGATGCCAACAATGTCAGATCAGCTATTGGAGACCGAATTTCGATAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGTTTTGTGCTGCAGTGGCGTCTCGCCCTTGTCCTCATTGCTGTATTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACCGGTTTCTCTGGTGACCTGGAAGCTGCGCATGCCAAGGCCACACAACTAGCTGGGGAGGCTATAGCCAATGTAAGGACTGTTGCAGCCTTCAATTCAGAAGCAAAAATTGTTCGCATTTTTGCTTCCAACCTTGAAACTCCGCTACAAAGGTGCTTTTGGAAGGGACAGATTTCTGGAAGCGGATACGGAATAGCTCAGTTTGCACTTTATGCTTCGTATGCACTTGGTCTTTGGTATGCTTCATGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACATTAACGCTGGCTCCTGAGTTCATCAAAGGAGGTAGAGCCATGCGATCAGTCTTTGATCTCCTTGACCGTAGAACCGAGATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGAGAAGTTGAACTTAAGCATGTGGACTTCTCGTATCCCACTAGACCCGATATGCCAGTTTTTCGCGACCTTAATCTCCGTGTCCGAGCCGGAAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGCGGCAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACGTCCGGCCGAGTCATGATCGATGGAAAGGACATTAGAAAATACAACCTCAAGTCCTTAAGACGACACATTTCTGTGGTACCTCAAGAGCCATGCCTATTTGCTACTACTATTTACGAAAACATTGCATACGGCCACGACTCAGCAACAGAAACCGAGATAATTGAAGCCGCGACACTTGCCAATGCTCACAAGTTCATATCTTCTCTACCAGACGGATACAAAACCTTTGTAGGGGAGAGAGGTGTCCAACTCTCCGGGGGACAAAAACAAAGAATAGCAGTCGCTCGCGCTTTTTTGAGAAAAGCCGAGCTTATGCTTCTTGACGAGGCAACAAGTGCACTTGATGCCGAATCTGAAAGGTCTGTTCAAGAGGCTCTAGACCGCGCTTCTACAGGAAAAACAACCATCATTGTTGCACATAAGCTATCGACTATCAGAAACGCCAATGTAATTGCTGTGATTGACGATGGTAAAGTAGCCGAGCAAGGTTCACATTCACAGTTAATGAAAAATCATCAAGACGGGATATACGCGCGCATGATTCAATTACAAAGGTTTACACCGAACCAGGTAATTGGTATGGCATCTGGTTCAAGTTCTTCAACATGA 4020 0.4391 MSKESEEIKTIEQWKWSEMQGLELVSDDMNSSDPFKGNLPTVTEEGVTVTVSGSENRVQVSKEMEETNKDDDCGGKEKKSQSVASVGFGELFRFADGLDYVLMTIGTVGAIVHGCSLPIFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSSLKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLIRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHKPGIDRNSESGLELEIVTGLVELKNVDFSYPSRPEVKILNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGQDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIVKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEIAHETAMNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSIYYNPDHRYMIREINKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISIIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEAKIVRIFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPEFIKGGRAMRSVFDLLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRVRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATETEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHKLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTPNQVIGMASGSSSST* 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0991 1339 CDD ABC_MTABC3_MDL1_MDL2 427 666 - -
Psa3g0991 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 105 392 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g0991 1339 SUPERFAMILY ABC transporter transmembrane region 746 1066 IPR036640 GO:0005524|GO:0016021
Psa3g0991 1339 Gene3D - 1073 1327 IPR027417 -
Psa3g0991 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1073 1321 IPR027417 -
Psa3g0991 1339 Pfam ABC transporter transmembrane region 103 376 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g0991 1339 Pfam ABC transporter transmembrane region 760 1029 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g0991 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 427 663 IPR003439 GO:0005524
Psa3g0991 1339 CDD ABC_6TM_Pgp_ABCB1_D2_like 749 1064 - -
Psa3g0991 1339 CDD ABC_6TM_Pgp_ABCB1_D1_like 103 400 - -
Psa3g0991 1339 ProSitePatterns ABC transporters family signature. 1221 1235 IPR017871 GO:0005524
Psa3g0991 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 666 IPR027417 -
Psa3g0991 1339 Gene3D - 425 690 IPR027417 -
Psa3g0991 1339 SUPERFAMILY ABC transporter transmembrane region 91 411 IPR036640 GO:0005524|GO:0016021
Psa3g0991 1339 Pfam ABC transporter 445 594 IPR003439 GO:0005524
Psa3g0991 1339 Pfam ABC transporter 1101 1249 IPR003439 GO:0005524
Psa3g0991 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 759 1046 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g0991 1339 MobiDBLite consensus disorder prediction 59 78 - -
Psa3g0991 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1082 1318 IPR003439 GO:0005524
Psa3g0991 1339 SMART AAA_5 454 640 IPR003593 -
Psa3g0991 1339 SMART AAA_5 1109 1301 IPR003593 -
Psa3g0991 1339 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 103 1324 IPR039421 -
Psa3g0991 1339 ProSitePatterns ABC transporters family signature. 566 580 IPR017871 GO:0005524
Psa3g0991 1339 CDD ABC_MTABC3_MDL1_MDL2 1082 1321 - -
Psa3g0991 1339 Gene3D ABC transporter type 1, transmembrane domain 150 1055 IPR036640 GO:0005524|GO:0016021
Psa3g0991 1339 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 103 1324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0991 Psa-Chr3 92531712 92538190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0991 105 683 Calmodulin-binding Proteins AT2G36910 39.243 8.85e-121 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0991 K05658 - gmx:100814667 2332.37