Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0963 ATGGAAGCAATAGGTGCAGCCATTACAAAAAACAACAGCGGTTACGATTCATTCTGTTTGACCAATGCTAAAAACAATAACATCAAAGTGAGTGACTCTGATCCTTTGAATTGGGGTGTTGCGGCGGAGGCAATGAAAGGTAGTCACTTGGACGAGGTGAAACGTATGGTGGATGAGTACCGGAAGCCGGTGGTCCGTCTTGGTGGTGAGACGCTCACAATTTCTCAGGTAGCTGCCATTGCCGCACATGATCATGGTGTGAAGGTGGAGCTGTCAGAATCTGCTAGGGCTGGCGTTAAGGCGAGCAGTGACTGGGTAATGGAGAGTATGAACAAAGGCACAGACAGTTACGGTGTCACCACCGGCTTCGGCGCCACCTCTCACCGTCGAACCAAACAAGGCGGTGCTTTGCAGAAAGAACTCATTAGATTTTTGAATGCTGGAATATTTGGAAATGGAAGTGAGTCAACTCATACACTACCACACACAGCAACAAGAGCTGCTATGCTTGTGAGAATCAACACACTTCTCCAAGGTTATTCAGGAATTAGATTTGAAATCTTGGAAGCTATAACCAAACTCATTAACAACAACGTCACCCCATGTTTACCACTCCGTGGTACAATCACAGCTTCTGGAGATTTAGTCCCTCTTTCTTACATTGCTGGTTTATTAACTGGAAGACCAAATTCCAAAGCTCATGGACCGTCTGGAGAAATACTTAATGCTAGAGAAGCTTTTCAGTCAGCTGGAATCAATGATGGTTTCTTTGAATTGCAACCGAAAGAAGGTCTTGCACTTGTTAACGGAACTGCTGTTGGTTCTGGTTTAGCTTCTATTGTTCTCTTTGAAGCTAACATATTAGCTGTGTTGTCTGAAGTCCTATCCGCTATTTTTGCTGAAGTTATGCAAGGGAAACCTGAGTTTACTGATCATTTGACACATAAGTTGAAGCACCATCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCTGCTAAGAAGTTGCATGAGATGGATCCTTTGCAGAAGCCAAAACAAGATAGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTCTTATTGAAGTCATTAGATTCTCTACTAAGCTTTGCATGGTGGAAACTTACTTTCAAGGAACACCTATTGGTGTATCCATGGATAATACACGTTTGGCTCTTGCGTCAATTGGTAAACTCTTGTTTGCTCAATTCTCTGAACTCGTCAATGATTTTTACAACAACGGGTTGCCTTCTAATCTCTCAGCTAGTAGAAATCCCAGCTTGGATTATGGATTCAAGGGATCCGAAATTGCCATGGCTTCTTATTGTTCGGAGTTACAATATCTTGCGAACCCAGTTACAACTCATGTTCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATATCTTCTAGGAAAACATATGAAGCCATTGAGATCCTTCAGCTCATGTCTTCGACATTCTTGATTGCACTTTGTCAAGCAATTGATTTAAGACATTTGGAGGAGAACTTGAAAAACTCAGTCAAGAATATGGTGAGCCATGTTGCCAAAAGGACTCTTACTACAGGTATCAATGGAGAACTTCATCCTTCAAGATTTTGTGAAAAGGACTTGCTGAGAGTGGTTGATAGGGAACATGTGTTCTCCTATATTGACGACCCTTGTAGTGCTACATATCCATTGATGCAAAAGCTAAGGCAAGTGTTAGTGGACCATGCATTAGTAAATGGTGAATCTGAGAAGAATTTGAACACATCAATCTTCCAAAAGATTGCAACTTTTGAGGATGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGGGTGCATACGAGAATGGAAATACAACAATTTCAAACAAGATCAAAGAATGCAGATCCTATCCACTTTACAAGTTTGTGAGAGAAGAACTGGGAACTAGTTTACTAACCGGAGAAAAGGTCATTTCACCCGGTGAAGAATGTGATAAATTGTTCACAGCTATTTGTCAGGGAAAAATCATCGATCCTCTTCTTGAATGCTTGGGAGACTGGAACGGTGCTCCTCTTCCAATTTCTTAA 2118 0.4188 MEAIGAAITKNNSGYDSFCLTNAKNNNIKVSDSDPLNWGVAAEAMKGSHLDEVKRMVDEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGSESTHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAREAFQSAGINDGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKLCMVETYFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNMVSHVAKRTLTTGINGELHPSRFCEKDLLRVVDREHVFSYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGNTTISNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGAPLPIS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0963 705 CDD PAL-HAL 70 515 IPR001106 -
Psa3g0963 705 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 207 223 IPR022313 GO:0016841
Psa3g0963 705 Gene3D - 518 639 IPR023144 -
Psa3g0963 705 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 25 704 - -
Psa3g0963 705 Gene3D Fumarase/aspartase (Central domain) 389 700 - -
Psa3g0963 705 Gene3D Fumarase/aspartase (Central domain) 272 386 - -
Psa3g0963 705 SUPERFAMILY L-aspartase-like 34 704 IPR008948 GO:0003824
Psa3g0963 705 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 34 384 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa3g0963 705 PANTHER HISTIDINE AMMONIA-LYASE 25 704 IPR001106 -
Psa3g0963 705 Pfam Aromatic amino acid lyase 72 386 IPR001106 -
Psa3g0963 705 Pfam Aromatic amino acid lyase 388 529 IPR001106 -
Psa3g0963 705 Gene3D - 25 271 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0963 Psa-Chr3 90781847 90784118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0963 4 704 Monolignol Biosynthesis Gene Families AT2G37040 77.701 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0963 K10775 - gmx:100803857 1206.05