Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0962 ATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAGTTGACTTAAGACATTTGGAGGAGAATTTGAAAAACTTAGTTAAGAACATTGTAAGCCAAGTTGCTAAAATGACCCTTATCACATGTTTCAATGGAGAACTTCATCCTTCAAGGTTTTGTGAAAAGGACTTGCTGAGAGTGGTTGACATGGAGCATGTGTTTGCCTATATTGATGATCATTATAGTGCTACATATCCATTGATGAAAAAACTGAGGCTGGTGTTAGTGGATCATGCATTAGTAAATGGTGAATCTGAGAAGAATTTGAACACATCAATCTTCCAAAAGATTGCAACATTTGAGGATGAGTTAAAGACGCTTTTGCCAAAAGAGATAGAAAGTACTAGGGTTGCATATGAGAGTGGAAATCCAACAGTTCTAAACAAGATAAACGGATGCATATCTTATCCACTTTATAGGAAAACATATGAAGCCATTGAGATCCTTCAACTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAGTTGACTTAAGACATTTGGAGGAGTATTTGAAAAACTTAGTTAAGAACATTGTAAGCCAAGTTGCTAAAATGACCCTTATCACATGTTTCAATGGAGAACTTCATCCTTCAAGGTTTTGTGAAAAGGACTTGCTGAGAGTGGTTGACAGGGAGCATGTGTTTGCCTATATTGATGATCATTGTAGTGCTACATATCCATTGATGAAAAAACTGAGGCTGGTGTTAGTGGATCATGCATTAGTAAATGGTGAATCTGAGAAGAATTTGAACACATCAATCTTCCAAAAGATTGCAACATTTGAGGATGAGTTAAAGACCCTTTTGCCAAAAGAGATAGAAAGTACTAGGGTTGCATATGAGAGTGGAAATCCAACAGTTCCAAACAAGATAAATGGATGCATATCTTATCCACTTTATAGGTTTGTGAGACAAGAGTTTATAGTTTTGTTTGACAAGAGTTGGGAACTAGTCTGCTAA 1002 0.3673 MSSTFLIALCQAVDLRHLEENLKNLVKNIVSQVAKMTLITCFNGELHPSRFCEKDLLRVVDMEHVFAYIDDHYSATYPLMKKLRLVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEIESTRVAYESGNPTVLNKINGCISYPLYRKTYEAIEILQLMSSTFLIALCQAVDLRHLEEYLKNLVKNIVSQVAKMTLITCFNGELHPSRFCEKDLLRVVDREHVFAYIDDHCSATYPLMKKLRLVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEIESTRVAYESGNPTVPNKINGCISYPLYRFVRQEFIVLFDKSWELVC* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0962 333 PANTHER HISTIDINE AMMONIA-LYASE 1 152 IPR001106 -
Psa3g0962 333 PANTHER HISTIDINE AMMONIA-LYASE 152 321 IPR001106 -
Psa3g0962 333 Coils Coil 15 35 - -
Psa3g0962 333 Gene3D - 182 303 IPR023144 -
Psa3g0962 333 Gene3D - 19 140 IPR023144 -
Psa3g0962 333 SUPERFAMILY L-aspartase-like 1 152 IPR008948 GO:0003824
Psa3g0962 333 SUPERFAMILY L-aspartase-like 152 325 IPR008948 GO:0003824
Psa3g0962 333 Gene3D Fumarase/aspartase (Central domain) 152 323 - -
Psa3g0962 333 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 152 321 - -
Psa3g0962 333 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0962 Psa-Chr3 90769315 90771207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0962 152 321 Monolignol Biosynthesis Gene Families AT3G53260 69.412 1.17e-81 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0962 K10775 - gmx:100803857 268.47