Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0952 ATGCCGATCAGAAACATCGCCATCGGAACTCCTCAAGAGGCCACTCACCCAGACACCTTGAAAGCCGGTTTGGCTGAGTTCATCTCCACTTTCATCTTCGTCTTCGCCGGTTCAGGTTCCGGTATCGCTTACAACAAGCTTACCGACAACGGTGCCGCCACTCCCGCCGGTCTTATCTCGGCTTCCATAGCACACGCATTCGCTCTCTTTGTTGCTGTCTCCGTCGGTGCTAACATCTCCGGTGGACACGTCAACCCCGCCGTCACCTTCGGCGCTTTCGTCGGTGGAAACATCACCTTACTCCGTGGTATCGTTTACATCATCGCTCAACTCCTTGGATCCATCGTCGCCTCCGCACTCCTCGTCTTTGTCACCGCATCGTCTGTGCCAGCATTCGCTCTATCCGCAGGAGTTGGAGTGGGTCCCGCTTTGGTGTTGGAGATTGTGATGACTTTCGGTTTGGTGTACACTGTGTACGCTACAGCCGTTGACCCAAAGAAGGGTAATATTGGAATTATCGCACCTATTGCTATTGGTTTCATCGTTGGTGCTAACATTTTGGTTGGTGGAGCCTTCACCGGAGCATCCATGAACCCCGCCGTGTCATTCGGGCCTGCTGTGGTGAGCTGGAGCTGGGCCAACCACTGGATCTACTGGGCCGGCCCACTTATCGGTGGTGGGCTTGCTGGGCTTATCTATGAGGTTCTCTTCATTAACAGCACCCATGAGCAGCTTCCAACCACTGACTACTAG 753 0.5418 MPIRNIAIGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTDNGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFALSAGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWANHWIYWAGPLIGGGLAGLIYEVLFINSTHEQLPTTDY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0952 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Psa3g0952 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Psa3g0952 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g0952 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Psa3g0952 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Psa3g0952 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0952 Psa-Chr3 89426473 89428493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0952 1 250 Major Intrinsic Protein MIP AT2G36830 80.080 6.63e-143 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0952 K09873 - gmx:547967 427.172