Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0932 GGTGAAAGCTATCTTAATACAATTATTGAATGGGGTGATTTTGGAAATCTGACCGGAACCTTTGACAGTTACACTTTTGGTGTCTTTGCCACAGAATTCATTGCCTACAATATCAGTTTTAAGAACACTTTTCCTCCTCCGTCACAAGGAGTGAAAGGAGCACAGGCAGTTGCATTGAGAGTTAATGGAGACAAAGCAGCATTTTATGGATGTGGATTTTATGGTGCACAAGACACTCTCCACGATGACCTAGGAAGACATTACTACAAAGGATGTTTTATTCAAGGATCCATTGACTTCATATTTGGAAATGCTAGGTCACTTTATGAGGATTGTATCTTAAGCTCTATAGCAAAACCCGAGTGGGTTGGAGACGGAGGATGTATTACAGCCCAGGGACAAGAATTGTTGGCAGATAATTCTGGATTTTCATTTCTCAATTGCTACATCAATGTTACTGGAAAACTATTGCTTGGAAGACCTTGGAGAAAATATGCCAAAGTCATTTTCTCAACTACATTCATGTCTGATGTTGTAAGTCCTATTGGATGGAATGACAAGCTTAAGGATGACTCAGTAAACCAGACTATTTTTTTTGGAGAGTACAACTGTAAGGGTCCTGGAGCTATAAGAACATCTCCTCCAAGAGCCCCTTTTGGAAAGCAACTCAAGGATGATGAAGCTGCTCCTTACATCTCTATTTCATATATTGATGGAAATGAATGGCTTCATCAAGTTTAG 741 0.3927 GESYLNTIIEWGDFGNLTGTFDSYTFGVFATEFIAYNISFKNTFPPPSQGVKGAQAVALRVNGDKAAFYGCGFYGAQDTLHDDLGRHYYKGCFIQGSIDFIFGNARSLYEDCILSSIAKPEWVGDGGCITAQGQELLADNSGFSFLNCYINVTGKLLLGRPWRKYAKVIFSTTFMSDVVSPIGWNDKLKDDSVNQTIFFGEYNCKGPGAIRTSPPRAPFGKQLKDDEAAPYISISYIDGNEWLHQV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0932 246 Gene3D - 1 246 IPR012334 -
Psa3g0932 246 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 245 - -
Psa3g0932 246 ProSitePatterns Pectinesterase signature 2. 94 103 IPR033131 -
Psa3g0932 246 Pfam Pectinesterase 7 240 IPR000070 GO:0030599|GO:0042545
Psa3g0932 246 PANTHER PECTINESTERASE 14-RELATED 1 245 - -
Psa3g0932 246 SUPERFAMILY Pectin lyase-like 1 244 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0932 Psa-Chr3 87791785 87793130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0932 1 244 Carbohydrate Esterase AT1G05310 51.613 4.06e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0932 - - gmx:100802034 321.242