Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0889 ATGGACACAGTTTTGGTGCCACCATGGCTGGAGCCATTGCTGAAAACACTGTTTTTCAACATGTGCCGGATTCATGCGGATGCAGCTCGGAATGAGTGTAACATGTATTGTTTAGACTGCAACAATGGCGACGGTGCCTTCTGCTTTTATTGCCGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGATAAGAAGATCATCTTATCACGATGTGGTGAGGGTGTCAGAGATTCAGAAAGTGTTGGACATAAGTGGAGTTCAGACCTATGTTATAAACAGTGCTAGAGTATTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGTAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGTCTCTTGGATTCATTTAGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGTTTTGCTATTGAAGGGGGTAAGAATGAAGCAATGAGAATGGAGGGGGTGTCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGTTCAACACAAGATATGTATCCTATCACACCTCCTCCTCCTCCTTTAAATGCAAGAAGAAGAAAAGGTATTCCTCACAGGGCACCTTTTGGTTCTTCATTCTAA 624 0.4151 MDTVLVPPWLEPLLKTLFFNMCRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFAIEGGKNEAMRMEGVSSSRSEEELREGSTQDMYPITPPPPPLNARRRKGIPHRAPFGSSF* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0889 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 204 - -
Psa3g0889 207 MobiDBLite consensus disorder prediction 158 207 - -
Psa3g0889 207 Pfam PLATZ transcription factor 65 136 IPR006734 -
Psa3g0889 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 204 - -
Psa3g0889 207 SUPERFAMILY B-box zinc-binding domain 18 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0889 Psa-Chr3 84082868 84085617 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa3g0889 PLATZ 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0889 - - gmx:100809455 340.117