Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0854 ATGAACATAACACTAGCATTGGTCTTAACCTTATCCTTAACCTTAGCATTTCTCTGCACATCAGCATCATTAACACATAGTGCACCAGATAATGATACACAAGCCCTCACTGAATTCCGTCTCCAAACCGATTTCCACGGCTACCTCGTCGGTAACTGGACCGGCGAGGATGCATGCAACTCCGCATGGCACGGAGTTGAATGCTCCCCAAACGGCAGAGTTGTAGCTCTATCCGTCCCTTCCCTCAATCTCCGAGGTCCGGTTGATTCTCTCTCAACGCTAACCTACTTACGATTCCTTGACCTTCACGATAATCGCTTGAACGGAACCATTGCTCCTCTCTTAAACTGTACTGATCTCGAACTACTCTATCTCTCAAGCAACGACTTCTCCGGTGTGATACCACCGGAGATATCGTCCTTGCGGCTTCTCATCAGAGTTGACATCTCTGATAACAATATCCATGGCGAAATCCCTAAAGAGCTTTCGAAACTGAAATATCTCCTCACTCTCCGGTTACAGAACAACGAACTCTCCGGTGAAGTTCCGGATCTTTCTTCTTCTCTACTCAATCTCAGAGAACTCAACATTACTAATAACGAACTTCAAGGACGCTTACCAGACGCCATGCTTACCAAATTCGGCAACAAAAGCTTCTCCGGCAACGATGATCTATGCGGATTGACGCCGTTACCAAATTGTCCTGTCACCGAAACTCATCCTCCTCCTCCTTCTGATGATGATGGTTCTGAAATTGTTCCTTCAAACCCTAGCTCTATGCCAAAATCAAGTAGAAATGCTAACGGTATCATTCCATCTGAAACTCCTTCGAGCAAACGGAAAATGTTGAGTCCCGGTGCCATTGTGGCGGTTACAGTGGCAGTTTCCGTGGCATTATTAGTGGTGGTTTCTTTCATGGTGGCGCAATGTTGCGGAAGAAGAGGAAGATCTAACTCAACTGTTGGGATGGATAGTGAGCTTGGAAAGAGAAAAAGCGAGAGTAGCAGTGGAAGCGAGAAAAAGGGTTACACTGCAAATAGCAACAATGGTGGTGTGGATAGAGATAGTGATGGAACAACCGAAACAGAAAGAAGCAAACTAGTATTTTTCGATCGGAGCAATGAGTTTGAGCTCGAAGATTTGCTTCGAGCTTCCGCAGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGAGCTGTTCTTGATGATGGGTGCACTGTTGCTGTTAAGAGACTCAAAGATGCGAATCCATGTGATAGGAATCAGTTTGAACAGTACATGGATGTTGTTGGAAAGCTTAGGCACCCTAATGTTGTTAGACTCAAAGCTTATTATTATGCTAAGGAAGAAAAGCTTCTGGTTTATGATTATCTCTCCAATGGAAGCTTATATTCTCTTCTTCATGGGAACCGTGGTCCGGGAAGGATTCCATTAGATTGGACAACAAGAATAAGCTTGGTGTTGGGGGCAGCAAGAGGCCTAGCAAGGATTCATGGAGAGTATAGTGCAGCCAAGATACCTCATGGGAATGTAAAATCTTCCAATGTGCTACTTGACAGGAATGGAGTTGCTTGCATAGGGGACTTTGGCTTGTCACTATTATTGAACCCTGCTCACGCGGTTGCGAGGCTGGGCGGGTCTAGAGCTCCCGAACAAGCGGAAGCGAAGAAGCTTTCACAAGAGGCGGACGTGTATGGTTTCGGGGTGTTGGTGTTGGAAGTTTTGACAGGAAGAGCTCCTTCCTCTCAGTACTCTTCTCCAATAGGAGTTCGTCCTTGTGTAGAATTCGAGGAAGAAGAAGTGGATCTTCCGAAATGGGTTCGGTCGATTGTGAAGAAAGAGTGGACATCAGAAGTGTTTGATCAGGAACTTTTAAGGTACAAGAACATCGAAGAGGAGCTTGTTTCAATGCTGAATATAGGACTAGCCTGTGTTGTGTCACAACCTGAGCAAAGGCCAACAATGTTGGAAGTTGTTAAGATGATTGAGGATATTAGAGTGGAACAATCTCCTCTAAGAGAGGATTTCGATGAATCTCGCACTTCGCTTTCACCTTCACTTGCTACTACCGAAGATTGCCAAGCTTAA 2091 0.4529 MNITLALVLTLSLTLAFLCTSASLTHSAPDNDTQALTEFRLQTDFHGYLVGNWTGEDACNSAWHGVECSPNGRVVALSVPSLNLRGPVDSLSTLTYLRFLDLHDNRLNGTIAPLLNCTDLELLYLSSNDFSGVIPPEISSLRLLIRVDISDNNIHGEIPKELSKLKYLLTLRLQNNELSGEVPDLSSSLLNLRELNITNNELQGRLPDAMLTKFGNKSFSGNDDLCGLTPLPNCPVTETHPPPPSDDDGSEIVPSNPSSMPKSSRNANGIIPSETPSSKRKMLSPGAIVAVTVAVSVALLVVVSFMVAQCCGRRGRSNSTVGMDSELGKRKSESSSGSEKKGYTANSNNGGVDRDSDGTTETERSKLVFFDRSNEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCDRNQFEQYMDVVGKLRHPNVVRLKAYYYAKEEKLLVYDYLSNGSLYSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSAAKIPHGNVKSSNVLLDRNGVACIGDFGLSLLLNPAHAVARLGGSRAPEQAEAKKLSQEADVYGFGVLVLEVLTGRAPSSQYSSPIGVRPCVEFEEEEVDLPKWVRSIVKKEWTSEVFDQELLRYKNIEEELVSMLNIGLACVVSQPEQRPTMLEVVKMIEDIRVEQSPLREDFDESRTSLSPSLATTEDCQA* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0854 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 687 - -
Psa3g0854 696 MobiDBLite consensus disorder prediction 317 360 - -
Psa3g0854 696 Pfam Protein kinase domain 387 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0854 696 MobiDBLite consensus disorder prediction 674 696 - -
Psa3g0854 696 MobiDBLite consensus disorder prediction 240 282 - -
Psa3g0854 696 SUPERFAMILY Protein kinase-like (PK-like) 387 663 IPR011009 -
Psa3g0854 696 PANTHER LRR RECEPTOR-LIKE KINASE 5 687 - -
Psa3g0854 696 ProSiteProfiles Protein kinase domain profile. 383 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0854 696 MobiDBLite consensus disorder prediction 251 280 - -
Psa3g0854 696 SUPERFAMILY L domain-like 30 211 - -
Psa3g0854 696 Gene3D Phosphorylase Kinase; domain 1 352 458 - -
Psa3g0854 696 MobiDBLite consensus disorder prediction 682 696 - -
Psa3g0854 696 Gene3D Ribonuclease Inhibitor 92 241 IPR032675 -
Psa3g0854 696 Gene3D Ribonuclease Inhibitor 25 91 IPR032675 -
Psa3g0854 696 MobiDBLite consensus disorder prediction 338 355 - -
Psa3g0854 696 Gene3D Transferase(Phosphotransferase) domain 1 459 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0854 Psa-Chr3 77397067 77400314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0854 31 692 Receptor kinase-like Gene Family AT2G36570 63.040 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa3g0854 Pkinase 2.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0854 - - gmx:100808402 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0854 3 77397067 77400314 Psa3g0854 3 77397067 77400314 ECH