Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0853 ATGGTATATCATCCTTCACAACATACTCTTGTTATTATTCTCCTACTCTTATCTTTCCCTTTAATCTTCCTCTTCCTCCTCAACCACCGTAGAAAAGTCTCCGCCGCCAAGCGCCGCCTTCCACCTGGACCACCGGGATGGCCCATATTTGGAAACATGTTCCAACTCGGAGAAATGCCTCACCGCACACTCACCAACTTAAGGCAAAAATATGGTCCAATTTTATGGCTCAAAATAGGTGCCATAAACACTATGGCAATACTCTCAGCCAAAGAAGCTACCATATTTTTCAAAAACCACGACCACAGTTTCGCAGATCGAACCATAACTGAAACCATGCGTGCTCATAATTATGACAAATCATCCCTAGCTTTGGCTCCTTACGGTTCCTACTGGCGACTCATGCGCCGTCTCGTGACGGTCGATATGTTGGTCATGAAACGCATAAACGACACTGTCTCCGTTCGTCGTAAATGCGTAGACGACATGCTCACTTGGGTTGCGAAAGAAGCAGTTCAGTTGAAAGAAGGCCGTGGACTTCACTTGTCACGGTTTGTTTTCTTCATGAGTTTTAACTTGTTTGGAAACTTGATGCTGTCGCGTGACATGTTTGATATGGAATCTGAAAATGGATCTGAGTTTTTTAAAGCGGTTATGGGACTGATGGAGTGGACCGGACATGCCAACGTGTCGGATTTGTTTCCTTGGTTAAGGTGGTTGGATCCACAAGGATTAAGGAGAAAAATGGATAGGGATATGGGAAAAGCTCTTAAATTTGCTTCCACGTTTGTGAAAGAGCGTTTGGATTTGGAAGGGGTCCGTGATGATGACAGAACAAGAGACTTCTTAGATGTGTTACTCGAGTTTCAAAGAAATGAGAACCAGAATTCACTCAACATCTCAGATAAAGATCTCAACATATTCATCTTGGAAATATTCTTGGCTGGATCAGAAACAACAAGCAGCACAATTGAATGGGCTATGACGGAGCTATTATGCAACCGTGAATGCATGTTGAAGGTTAAAACTGAGCTTAACTCAGTGGTTGGTGGTGCTAAAGATGTTGAAGAGAGTGACATAGAAAAACTTCCATACCTACAAGCTGTTGTTAAGGAATCACTAAGGTTACATCCTCCAATTCCACTACTTGTCCCAAGAAAAGCAGTGCAAGAGACAGAGTTTATGGGATACTTGATACCAAAAGACACACAAGTGTTTGTGAATGCATGGGCTATTGGAAGAGACCCAGATGTTTGGGAAGAACCATTGGTTTTCAAACCAGAGAGGTTTTGGGATAGTGATAGTAAGAGTTATAAGACAGATTATAAAGGACAGCATTATGAGTTTATACCATTTGGAGCTGGAAGAAGAATGTGTGCTGGTGTGCCTTTGGCTCATAGGATTCTTCATCTTGTTTTGGGATCTTTGCTTCATCGATTTGATTGGGAGCTTGATAGCAATGTTTCGGCGTTGACTATGGATATGAGAGACAATCTTGGCATAACCATGAGAAAGTTTGAACCATTGCTTGTTGTGCCCAAAGACGCATTTTAA 1554 0.4234 MVYHPSQHTLVIILLLLSFPLIFLFLLNHRRKVSAAKRRLPPGPPGWPIFGNMFQLGEMPHRTLTNLRQKYGPILWLKIGAINTMAILSAKEATIFFKNHDHSFADRTITETMRAHNYDKSSLALAPYGSYWRLMRRLVTVDMLVMKRINDTVSVRRKCVDDMLTWVAKEAVQLKEGRGLHLSRFVFFMSFNLFGNLMLSRDMFDMESENGSEFFKAVMGLMEWTGHANVSDLFPWLRWLDPQGLRRKMDRDMGKALKFASTFVKERLDLEGVRDDDRTRDFLDVLLEFQRNENQNSLNISDKDLNIFILEIFLAGSETTSSTIEWAMTELLCNRECMLKVKTELNSVVGGAKDVEESDIEKLPYLQAVVKESLRLHPPIPLLVPRKAVQETEFMGYLIPKDTQVFVNAWAIGRDPDVWEEPLVFKPERFWDSDSKSYKTDYKGQHYEFIPFGAGRRMCAGVPLAHRILHLVLGSLLHRFDWELDSNVSALTMDMRDNLGITMRKFEPLLVVPKDAF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0853 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa3g0853 517 Gene3D Cytochrome P450 25 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 Pfam Cytochrome P450 41 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 515 - -
Psa3g0853 517 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 515 - -
Psa3g0853 517 SUPERFAMILY Cytochrome P450 41 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g0853 517 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0853 Psa-Chr3 77310212 77313537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0853 21 513 Cytochrome P450 AT3G52970 43.750 2.29e-144 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0853 K22983 - gmx:100785241 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0853 3 77310212 77313537 Psa3g0853 3 77310212 77313537 ECH