Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0846 ATGAGGCATCTTTTTGGAACTTGGAGAGGAGTCTTTCCTCCCCAGACCCTGCAAATAATTGAGAAAGAACTTGGCTTTGCTCCCACAGTCAATGGTTCAGCTTCTGCATCTGCTACAATTAGAAATGATTCTCAGTCTCAACGTCCACCTCATAGCATCCATGTAAATCCCAAATATTTAGAAAGGCAACGTCTTCAGCAGTCTAGCAAGACTAAAGGAGTATTTGATGATATGACTGGAGTTATTTCAAATGCAAATGAGGACTCAGAGAGGTCAAATAGAGCTTTGGGTGTTGCACGGCCGTGGCTGGATTCTAGGGTTAACATGCGTAATAACCAGCATACTCATAGAGATGCATTTAATGATTCTGTTCCTGACAAGAGCATCGACGGAGCCTATGGAGATGAGGAATATAATTCTAGTGTTTCAAATAATTTGGGTTCAGATGTTGGAAGAACTGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATGGTTTTTCTAATTACGAAGCACCAAAGCCTATGAATTTGGATGCACATAACATAAGGAGCAGTGCCAGGTCAAGGAACTGGAAAAATTCAGAGGAAGAGGAGTTTGTGTGGGATGAGATGAACCCTGGTTTGCCCGAACATGTACCTAATGTCTCTAGCAACTTGAGCTCAGACCCATGGATTGCCGATGACGACAATTTGGAAAGTGAAGATCACCTCCAAATGACACATCCAATTAGAACTAAAGTTGATAAAGAAATATCCACCGTTAAGAAACAACTACCATCATCAGGGGGCCATTCATCATTATCATGGGGGTTGCAGAAGCAGCTCCCAAGTGCCAAGTTCAATATGAAGTCAGGTCACTCAGAAACATTTGTTTCAGCTCCTAGTGGCTTACCCAAGAATTCAAACTCTTTGGCTGCAAGGATGAGAAGTCAGTCTTCTATGCCGCATACAACAATAGGATCGGCCAAAATTATGGGACAACAACAATTTGATTCTGAAGGTGCCGAATCCCCTTCTGAACAGTCACCTTTGCAACAACAGTCTCCATCCGTGCCAGTAACAACACATCACGCTCCTTCAGTGCGAAATTTGGCTGAGCAAGATTGTTCACAAACTCTTAAAACATCTCAACATTTGGGTGGTCCGCAAAGTCAATATATTAAAGATCCCACACTTGCAACTCGTCCCAATGTTCCGGTTGGTACCTTGCGGAAATCACAAGCAAAGGACACGCGGGGTCCATCATCTTCTGTAACTTCTGTCCAGGCAAAGCCTCAACAACGACAGCTGGGCCCTTCACAGGTTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAGTCCAGAGTTTCTTTAGCCAAAGCCAAAGCCAAAGAAACTTCAGAAAAGTCAACCACAAAAAGTCATCCAGCTCCATCTGTGAAGAGTGGAGTTATCCCCAACAAATCTGGACCAATTACCAAAAGTCTGGATGCAAGTAACCGTCCATCTCAATCAGGGGTTAAGCCTACTCGGTCAATTGGTGCTTCCCCTACGACATTAATTTCTTCGGGGTCGTCCTCCGTGTCATTAGGTTCTTCAAATGATCATTCACAGGCTTTGCCAAAACTACCTCAGGGGAAGGTTGTAAAGAAGCAAAAAAAATCTACTCAACCATCTGCTTCTTCTAATGAACGTGGTGCATCAGCCCCGAGCTCAAATACAGTCAATAAGAATACCTTGAATCCAATTTCAAATCTTTTAAGTTCATTAGTTGCTAAAGGTTTGATATCCGCAGGAACGGAGTCGGCAACTGTAGTGCCCAATGAGACGGTGATTCGATCGAAAGACCAAACTGAAAGCATCACCACCAGCTCCTCATTGCCAGTTGTTTCAGTTCTTGATTCTGCAACTGTCCCAATAAAATCTTCCAAAGTTGAGGTAGATGGTGATGAGGTGGATGATGATGAGGTAGACGGTGATGAGGTAGATGATGCTGCAAAAGCCTCACTTGCCTTGTCTCAATCAACTAGCACAGAAATTATAAATCTCATTGGCTTTGATTTCAAACCTGATGTAATTCGAGAAATGCACCCACATGTAATCACAAAATTATTGGATGAACTCCCACATCATTGCAGTAAATGTGGTATTAGGCTTAAACACCCAGAACAGTTCGATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTGTGAATGGAGCATCAAGAAGATGGTATGCAAAGTCAAATGACTGGATTGCTGGCAAGGCTGGATATCTGTCCGAGTCTGAATTTACTGATTCTGTAGATGAACTTGACGATGAAAACATATATGAGAGTCAATTGGATTCTATGGTTTTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGTGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGAGCAATGGATGTTCAAGGGGGCTGTTTACTTGAACAATTCCGATAACATTAGTGAGATGGAAAGTAGAAATGTGGGCCCCATCATTCATGCTAGATGCTTATCAGAGAACAAAATATCTGTTGTGACCAATACAGAGCTTGATTAA 2604 0.4259 MRHLFGTWRGVFPPQTLQIIEKELGFAPTVNGSASASATIRNDSQSQRPPHSIHVNPKYLERQRLQQSSKTKGVFDDMTGVISNANEDSERSNRALGVARPWLDSRVNMRNNQHTHRDAFNDSVPDKSIDGAYGDEEYNSSVSNNLGSDVGRTGSRLIGGVAETLSGQRNGFSLKHGFSNYEAPKPMNLDAHNIRSSARSRNWKNSEEEEFVWDEMNPGLPEHVPNVSSNLSSDPWIADDDNLESEDHLQMTHPIRTKVDKEISTVKKQLPSSGGHSSLSWGLQKQLPSAKFNMKSGHSETFVSAPSGLPKNSNSLAARMRSQSSMPHTTIGSAKIMGQQQFDSEGAESPSEQSPLQQQSPSVPVTTHHAPSVRNLAEQDCSQTLKTSQHLGGPQSQYIKDPTLATRPNVPVGTLRKSQAKDTRGPSSSVTSVQAKPQQRQLGPSQVEVTLKAKQPLKSRVSLAKAKAKETSEKSTTKSHPAPSVKSGVIPNKSGPITKSLDASNRPSQSGVKPTRSIGASPTTLISSGSSSVSLGSSNDHSQALPKLPQGKVVKKQKKSTQPSASSNERGASAPSSNTVNKNTLNPISNLLSSLVAKGLISAGTESATVVPNETVIRSKDQTESITTSSSLPVVSVLDSATVPIKSSKVEVDGDEVDDDEVDGDEVDDAAKASLALSQSTSTEIINLIGFDFKPDVIREMHPHVITKLLDELPHHCSKCGIRLKHPEQFDRHLEWHATKEREQNGVNGASRRWYAKSNDWIAGKAGYLSESEFTDSVDELDDENIYESQLDSMVLADENQCLCVLCGELFEDVYCQEREQWMFKGAVYLNNSDNISEMESRNVGPIIHARCLSENKISVVTNTELD* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0846 867 MobiDBLite consensus disorder prediction 555 581 - -
Psa3g0846 867 MobiDBLite consensus disorder prediction 385 403 - -
Psa3g0846 867 MobiDBLite consensus disorder prediction 340 370 - -
Psa3g0846 867 MobiDBLite consensus disorder prediction 420 448 - -
Psa3g0846 867 MobiDBLite consensus disorder prediction 385 581 - -
Psa3g0846 867 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 864 - -
Psa3g0846 867 MobiDBLite consensus disorder prediction 491 545 - -
Psa3g0846 867 ProSitePatterns Zinc finger C2H2 type domain signature. 717 737 IPR013087 -
Psa3g0846 867 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 864 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0846 Psa-Chr3 76941325 76949261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0846 689 855 C2H2 Transcription Factor Family AT4G04885 35.632 5.98e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0846 K14400 - gmx:100788958 951.814