Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0833 ATGGAAATGGAAAACCATAACCATCATCATCATGAACAGCACCAGCACTACGGTAGTAATACTATAACTGATCTCACACAGCTCATTAGCATTGGACAAAGGTCAACAACAACTAACCACTTCCCCACGGCGGAGCTATTCCCCTCCGGCAACCACCCAAATCTGGCAGTAACGGCGACACAACAACAATACGAGATGATGATGTTTGGTCGTCAGGTAGCCGATATAATGCCTCGGAGTCTTCATGACTTTGTTTCAAGAGATTCTCCTGCTGTTGCTGCTACTGCTACTGCTACTACCACTACAACGAGCGCTTCAACTCCTTCTCTTAGCGGTAACTTAGAGGCGGAAACTACTGGTTGCATTGGTGGAGGAGGTGGAAACATCGTTGATGCTTCCACCGGTAGATGGCCGAGACAAGAGACTCTTACTCTTCTTGAAATCAGATCTCGTCTTGATCCACAATTCAAAGAAGCTACTCAAAAGGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTGTGAAGAGCATGGTTATCAAAGGAGTGGAAAAAAATGCAGGGAGAAGTTTGAAAATCTATACAAATACTACAAGAAAACAAAAGAAGGAAAAGCAGGAAGACAAGATGGAAAACACTACAGATTCTTTCGTCAACTCGAAGCCTTATATGGCGAAAACAACAATAACCCTTCTTCATCTTCACTCCCACAAAACAATTTCGGAACCAACAACAATCAAGAAATGTTTCATTCTCACAACAAATATTGCGATAGTCTCAGCCTCACAAACTCCACCGAATTCGACACGTCTTCGTCTGACAACAACGACGACAACGATCATAGCATCGAGGGACTCAAGGAGAACGAGGGCTCCATGGATAAGCGAAAAAAGAGGATGAGCGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATCGACTCACAGGTGAAGAAGTTGGTAGAGAAGCAAGAGGAATGGTTGGAGAAACTCACGAAAACACTTGAACAAAAGGAAAAGGAGAGAGTTTTGAGAGAAGAAGAATGGAGGAAACAAGAGAAAGAGAGGTTGGAAAAAGAGCATAATTTTTGGGCTAAAGAAAGAGCATGGATTGAAGCTAGAGATGCCGCTTTAATGGAAGCTTTGCAGAAACTAAAAGGAAACGATGAAACAATAACAAAGACGCAATCCTCTTCTCATGATGGAAACAAGAAGAGAAAGGAAAATACAAGAGGATGTTTCTACTTTGATAATAACAACAATGTTGAAAGATCTTGTTTATATAACAACAATGGAGTTGGAGTTGGAGTAGGAGTAGGAGTTTCCTATTGTGATGATCAAAGGGAAGTACAAACAAACGACGGTTCGAATTCTAACAACGTTGTTGTTGCAGCTGAAAGTTGTTTTCCATTTTTGATGGGTGAGGGTGGAAATTTGTGGGATAATTACAGGGTTAATAAACCTAATCAAAACCAGTGA 1479 0.4138 MEMENHNHHHHEQHQHYGSNTITDLTQLISIGQRSTTTNHFPTAELFPSGNHPNLAVTATQQQYEMMMFGRQVADIMPRSLHDFVSRDSPAVAATATATTTTTSASTPSLSGNLEAETTGCIGGGGGNIVDASTGRWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNNPSSSSLPQNNFGTNNNQEMFHSHNKYCDSLSLTNSTEFDTSSSDNNDDNDHSIEGLKENEGSMDKRKKRMSGRSFWKVKIKDFIDSQVKKLVEKQEEWLEKLTKTLEQKEKERVLREEEWRKQEKERLEKEHNFWAKERAWIEARDAALMEALQKLKGNDETITKTQSSSHDGNKKRKENTRGCFYFDNNNNVERSCLYNNNGVGVGVGVGVSYCDDQREVQTNDGSNSNNVVVAAESCFPFLMGEGGNLWDNYRVNKPNQNQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0833 492 Pfam Myb/SANT-like DNA-binding domain 136 222 IPR044822 -
Psa3g0833 492 ProSiteProfiles Myb-like domain profile. 135 194 IPR001005 -
Psa3g0833 492 CDD GT1 136 201 - -
Psa3g0833 492 PANTHER - 390 481 - -
Psa3g0833 492 PANTHER - 38 394 - -
Psa3g0833 492 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 390 481 - -
Psa3g0833 492 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 38 394 - -
Psa3g0833 492 Gene3D - 137 199 - -
Psa3g0833 492 Coils Coil 321 348 - -
Psa3g0833 492 MobiDBLite consensus disorder prediction 267 297 - -
Psa3g0833 492 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0833 Psa-Chr3 74017898 74020774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0833 12 387 Trihelix Transcription Factor Family AT5G03680 47.692 9.23e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa3g0833 Myb_DNA-bind_4 6.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0833 - - cam:101499561 522.702