Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0821 ATGAGTAATACCATGAAAATGTTACAAAATTGGTTACTGCTACTTCTACTACCCATCTTTCTCCACTGTTTTCCTATACTGATCCAAGGATCAAATCAACATGAAAGAAAGCCATATATTGTATACATGGGAGAACTACCAGCTGCAAGAACCTATACTACTATGGAACTACACCACCATAACATGTTGGAGTCTGCAATTGGAAACAAGCAGTTAGCTAGAGAATCAAAAATACATAGCTACGGAAAGAGCTTCAATGGATTCGTTGCACGACTTTTGCCACATGAAGCACAGAAATTGCAAGAGGAGGAGAATGTGGTATCTGTGTTTAGAAATACGTACCATAAACTACACACAACAAGGTCTTGGGATTTCATGGGAATGCCCCTGAAAGTGAAGAGAAACAGAAATATAGAAAGTCACATCATTGTGGGCGTGTTAGACACAGGTATTTGGGTTGATTGTCCTAGTTTCAATGATGTGGGGTTAGGACCTCCCCCGCGGAGATGGAAAGGCAAGTGCGTAACAGGAGCCAACTTCACCGGCTGCAACAACAAGGTGATAGGAGCAAAATACTTCAACCTCGACCCAACTGGTCCAGTCATCCCAAACCCGAGTCCCGTGGATGATCAGGGCCATGGGACTCACACGTCGTCGACAGTGGCTGGATCAGTGGTGAGAGGTGCGAGTTTTTACGGCGTTGGGAAGGGCAATGCGCGTGGCGGTGTCCCGTCAGCACGCATAGCAATGTACAAGGTTTGTTGGAGCGTTGGGTGCAGTGACATGGACATGCTTGCTGCTTTTGATGAAGCCATTGCTGATGGTGTCAACCTCATATCAGTGTCTATTGGTGGTCCCTCGCGTCGGTTTTTCTCTGACCCAATTGCTATTGGATCATTTCATGCTATGAGAAGAGGTGTTCTCACTTCTTGCTCAGCAGGAAACGATGGTCCTCGACCTACGTCTGTTGAGAATGTTGCTCCTTGGATTTTGACTGTTGCTGCTTCCACCGTCGATAGACAGTTTACAACACAAGTAGCCTTTGGTGATGGAAAGAGTGTTCAGGGACTATCTATCAACACCTTCTCCCCTGAGAAAAAGATGTATCCCCTGACTAGTGGACTTCTTGCTGCTAATCTTAGTGGAAACGAATATGGAAATTCTAGAGGTTGTGATTACGGGACTCTAAGCAAGGATAAGGTGATGGGAAGGATAGTGTATTGTACTGAGGGTTCAGGCAACCAGGACATGGTAATTAAGCAGTTAGGAGGAGCAGGAACCATTATAGGAGATGAAGAGATAGAAGATGGTTCCTACACCACACTTATTGCAGGGGCATTTGTTGATATGAATACAGTAGGCAAAAACATTGAAATCTATATTAATTCCACTAAGAATCCTCAAGCTGTGATATACAAATCAGCAGCTACGAAATTCCCTGCTCCATATCTTGCTTCTTTTTCATCTAGAGGTCCGCAATATATCAATCGTAACATCCTCAAGCCTGACTTGGCTGCCCCAGGAGTGGACATACTAGCTGCTTATTCCAAATTGACATCAGTAACAGGGTATCCCGAAGACACGCGTTATAATGTTTTTAATATAATATCAGGAACATCCATGGCTTGTCCACATGCAGCTGCAGCTGCTGCTTATGTTAAATCCTTTCATCCTGACTGGACTCCTGCAGCAATTAAATCTGCCCTCATGACCACTGCAACTCCTATAAAAGTCAAACCCAACGACGACAGTTTCACAGAACTGGGAATAGGGTCGGGACAGATTAGCCCAGGAAAAGCATTAAATCCTGGCCTAGTTTATGACATTAGAATGAACTCCTATATTGCCTTCCTTTGCAAGGAAGGCTACAACAGCACAGACATTGGTATCCTGATTGGAATCAAGAGTTTCAATTGCTCCAGTGTTAAACCAGCAACAGGCACTGATGGAATCAACTACCCTACCATGCATATACAGCTCCTGAGTGGCAGTTCTGATATTTCTGCAGTTTTTTACAGGACTGTAAAAAATGTAGGATATGGAGCTTCAACATACAAGGCTAAAGTCACAGCGCCTAAGGGTCTTTCTGTGGAGGTTATCCCAAATACGTTGACGTTTACTCAGTTGCGCCAAGAACTGTCATTTAAGGTTGTCCTGAAGGGGCCTCCAATGCCGACAGAGACATTGACATTATCTGCATTACTCGAATGGAATGACTCTAAACACAATGTTAGAAGTCCAATAGTTGTCGTTAGGCCATCATTGTGA 2268 0.4409 MSNTMKMLQNWLLLLLLPIFLHCFPILIQGSNQHERKPYIVYMGELPAARTYTTMELHHHNMLESAIGNKQLARESKIHSYGKSFNGFVARLLPHEAQKLQEEENVVSVFRNTYHKLHTTRSWDFMGMPLKVKRNRNIESHIIVGVLDTGIWVDCPSFNDVGLGPPPRRWKGKCVTGANFTGCNNKVIGAKYFNLDPTGPVIPNPSPVDDQGHGTHTSSTVAGSVVRGASFYGVGKGNARGGVPSARIAMYKVCWSVGCSDMDMLAAFDEAIADGVNLISVSIGGPSRRFFSDPIAIGSFHAMRRGVLTSCSAGNDGPRPTSVENVAPWILTVAASTVDRQFTTQVAFGDGKSVQGLSINTFSPEKKMYPLTSGLLAANLSGNEYGNSRGCDYGTLSKDKVMGRIVYCTEGSGNQDMVIKQLGGAGTIIGDEEIEDGSYTTLIAGAFVDMNTVGKNIEIYINSTKNPQAVIYKSAATKFPAPYLASFSSRGPQYINRNILKPDLAAPGVDILAAYSKLTSVTGYPEDTRYNVFNIISGTSMACPHAAAAAAYVKSFHPDWTPAAIKSALMTTATPIKVKPNDDSFTELGIGSGQISPGKALNPGLVYDIRMNSYIAFLCKEGYNSTDIGILIGIKSFNCSSVKPATGTDGINYPTMHIQLLSGSSDISAVFYRTVKNVGYGASTYKAKVTAPKGLSVEVIPNTLTFTQLRQELSFKVVLKGPPMPTETLTLSALLEWNDSKHNVRSPIVVVRPSL* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0821 755 Gene3D - 339 477 - -
Psa3g0821 755 ProSiteProfiles Serine proteases, subtilase domain profile. 122 601 - -
Psa3g0821 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Psa3g0821 755 SUPERFAMILY Subtilisin-like 117 605 IPR036852 GO:0004252|GO:0006508
Psa3g0821 755 Gene3D - 618 752 - -
Psa3g0821 755 CDD Peptidases_S8_3 115 574 IPR034197 -
Psa3g0821 755 CDD PA_subtilisin_like 349 471 - -
Psa3g0821 755 Pfam Subtilase family 140 576 IPR000209 GO:0006508|GO:0008236
Psa3g0821 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 751 IPR045051 -
Psa3g0821 755 PANTHER CUCUMISIN PROTEIN 27 751 - -
Psa3g0821 755 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Psa3g0821 755 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Psa3g0821 755 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Psa3g0821 755 Pfam Peptidase inhibitor I9 39 118 IPR010259 -
Psa3g0821 755 Pfam Fibronectin type-III domain 651 750 IPR041469 -
Psa3g0821 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 118 IPR037045 -
Psa3g0821 755 Gene3D Peptidase S8/S53 domain 142 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0821 Psa-Chr3 72500052 72504216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0821 7 572 Subtilisin-like Serine Gene Family AT5G03620 60.659 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0821 - - aip:107648262 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0821 3 72500052 72504216 Psa3g0821 3 72500052 72504216 ECH