Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0815 ATGGACTTTCATCTGAAACAATGGAGAAACCAGCATGAGTCAGAACAACAACAACATTCTACAAAGATGCCAAAACTTGCTCTTCAGCCTGCACTATCTCATCAACAACAATCTTCTGTTACTCCTGCACTTCCTTTCTTTGTACCTCAACCCAACAACACCAAAGTCACTAACAACTTGTCAGATTCCACATTATCACCTTCCTCCAACAGATCATTTCCTAGAATGGGAAGCCATTTTAGCTTGTCTCAGTGGCAAGAACTTGAGTTACAGGCTTTGATATTCAGGTACATGTTGGTTGGTGCTTCTGTTCCTCCTGAACTTCTTCAACCTATCAAGAAAAGTCTTCTTCATTCATCTCCTTATTTTCTTCATCACCCTCTTCAACATTATCCACCTGCAGCTTTGTTGCAAACGGGGTATTGGGGAAGAGGAGCAATGGATCCAGAGCCCGGTCGTTGTCGGAGAACCGACGGCAAAAAGTGGCGGTGCTCGAGGGATGTGGTGGCTGGACAAAAGTACTGTGAAAGACACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTGCCGGTGCTGGTAGTGCATCTTTCAATGCTTCTTCCACTATTTCTTCTCAGCCTCTTGTTACTTCCTCAATGAAATCTCCTTTCAATCTTCTTCACCTTAATGAACGTTCATCTGGAAGCAATAATGAAGAGAAGAGATTATTTGAAAACGAAGATGATCATGTGGGTGGGGATGGAAGATCAGGTGGGCAAATGCTAAGGCATTTCTTCGACGATTGGCCGAGATCACTGCAAGAATCTGACAATGGTGGGTCATCCTCCACATGTCTTTCAATATCAATGCCAGGAAATAATAACACCAACAAGACTAGTTCATCTTCAGATGTGTCATTGAAATTGTCTACCGGTTATGGTGAAGAACCATGTCCTAGAAATGTGAATGTGGGCCTAGAAACTGAGCAACAACAGCAACAACAAATTCAATTGAATTGGGTTGGAGGATGGAATTCAGGTAATCAAGTGAGTTCTTCAATGGGAGGACCACTTGCTGAAGCACTTAGATCATCATCCACTTCAACTTCTTCACCTACTAGTGTTTTACATCAATTGCCACGTTCTTCTGCTTCTGAGACCAGCTACATTAGTACTTGA 1182 0.4298 MDFHLKQWRNQHESEQQQHSTKMPKLALQPALSHQQQSSVTPALPFFVPQPNNTKVTNNLSDSTLSPSSNRSFPRMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSPYFLHHPLQHYPPAALLQTGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTSAGAGSASFNASSTISSQPLVTSSMKSPFNLLHLNERSSGSNNEEKRLFENEDDHVGGDGRSGGQMLRHFFDDWPRSLQESDNGGSSSTCLSISMPGNNNTNKTSSSSDVSLKLSTGYGEEPCPRNVNVGLETEQQQQQQIQLNWVGGWNSGNQVSSSMGGPLAEALRSSSTSTSSPTSVLHQLPRSSASETSYIST* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0815 393 MobiDBLite consensus disorder prediction 352 393 - -
Psa3g0815 393 MobiDBLite consensus disorder prediction 1 19 - -
Psa3g0815 393 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa3g0815 393 PANTHER - 8 393 IPR031137 GO:0005634|GO:0006351|GO:0032502
Psa3g0815 393 ProSiteProfiles WRC domain profile. 148 192 IPR014977 -
Psa3g0815 393 SMART QLQ_2 78 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa3g0815 393 MobiDBLite consensus disorder prediction 20 34 - -
Psa3g0815 393 MobiDBLite consensus disorder prediction 178 207 - -
Psa3g0815 393 MobiDBLite consensus disorder prediction 1 34 - -
Psa3g0815 393 Pfam QLQ 79 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa3g0815 393 Pfam WRC 149 191 IPR014977 -
Psa3g0815 393 PANTHER GROWTH-REGULATING FACTOR 3 8 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0815 Psa-Chr3 71649829 71652574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0815 1 380 GRF Transcription Factor Family AT3G52910 48.990 5.39e-97 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Psa3g0815 WRC 2.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0815 - - gmx:100814842 537.724