Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0809 ATGGCGGAAGAACACCGATGCGAAACTCCGGAAGGTCACAGACTCTGCGCTAACAACTGCGGCTTCTTCGGGAGCTCAGCTACGATGAATTTCTGTTCAAAATGTTACCGAGACATTCATTTGAAGGAGCAAGAACAAGCCAAAACCAAATCCACAATCGAAACCGCTCTTTCTTCTGCCTCCTCCTCCGCCGCTACCGTAGTTGTTGAATCTGCGGTTCTAGAGATCGAATCTCTCCCTCAACCACCGGTACCGTCGATCGTGACTAACGCGTCGGAATCTTCGATCGGATCGGTTCAACCAAACCGGTGCGGGACGTGTAGAAAACGGACCGGGTTAACCGGATTCAAGTGCAGATGTGGAATCACGTTTTGTGGGACCCACAGGTATCCGGAGAAACACGAGTGCGGTTTCGATTTCAAGGCGGTGGGAAGAGAGGAGATAGCTAAAGCGAATCCTGTGATCAAAGCCGATAAGCTGAGAAGAATTTGA 492 0.5041 MAEEHRCETPEGHRLCANNCGFFGSSATMNFCSKCYRDIHLKEQEQAKTKSTIETALSSASSSAATVVVESAVLEIESLPQPPVPSIVTNASESSIGSVQPNRCGTCRKRTGLTGFKCRCGITFCGTHRYPEKHECGFDFKAVGREEIAKANPVIKADKLRRI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0809 163 Gene3D - 1 64 - -
Psa3g0809 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 163 - -
Psa3g0809 163 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Psa3g0809 163 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Psa3g0809 163 SUPERFAMILY AN1-like Zinc finger 94 158 IPR035896 -
Psa3g0809 163 Pfam AN1-like Zinc finger 104 140 IPR000058 GO:0008270
Psa3g0809 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Psa3g0809 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Psa3g0809 163 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 163 - -
Psa3g0809 163 Gene3D - 84 159 IPR035896 -
Psa3g0809 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
Psa3g0809 163 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0809 Psa-Chr3 71276803 71278139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0809 1 163 C2H2 Transcription Factor Family AT3G52800 51.445 5.34e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0809 - - gmx:100527251 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0809 3 71276803 71278139 Psa3g0809 3 71276803 71278139 ECH
Psa3g0809 3 71276803 71278139 Psa6g1143 6 44738075 44747091 PCT