Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0792 ATGATGGTAAGGGAGGGAGAGATGAATTGGCAACAAGGCGAGGTGGAATCGTTGCAGAGGGAGGAAGAAGAAGCGATCAGGAACGATGTTAATAATGTCATGTCTTCGTCACTTGGAAGACAGTCGTCGTCGATATACTCGCTCACGTTGGACGAGTTTCAGCATAGTCTATGTGAAAGTGGCAAGAATTTCGGTTCCATGAATATGGATGAGTTTCTGAGTAGTATTTGGAATGCAGAAGAAAACCAGCAACAAGCTGGTTCCAATAATAATAACAACTTGTCTGTGATTCAGAAGGGGATTAGTAAACAGGTGAGTCTTCCTCGGCAAAATTCGTTGTCGATTCCTGCACCTCTTTGCAGGAAGACTGTAGAACAGGTTTGGTCTGAGATACACCGAGAACAACAGCAACAGCAACAACTCCATCACAACAGCAATGTTGCTCATAATACCGAGTCTACCCCTCGACAACCGACTTTTGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTGGTTAGGGAACAACAGGCTGCTATGCAGGTTGCAATGGCACCTCCTGCAGTATCATCTCACCGGCCGCAGCAGCATTACACTGCGTTGTATCCGAATAACACCGCTACAATGGCTCAGGCTGCTCCTTTCGCTATTGGCGGAGGCGGTGGGAATGTGGTTGTACCAACTTACCAAGCGGTGGCTCAAGGGGGTGGGGCAGTTGGAGAGCCTTCGGGTTCGGGGTATCCTGGGAATAGTAAAAGAGATAATATAGGTACCGGATATCCAGCACCACCGGCCGTTTGTTTCGGAGGGAGGGTGGTGAACGGAGGAGTGGGTGGTTATGGAATGCCAGTGGCACAAACTATGGGAATGGGCGGACCAGTTAGTCCGGTTTCGTCCGACGGGATTGGTAACGAAAACTCGGGTGGTCAATTTGGACTTGACATGAGTGGTTTAAGAGGAAGAAAGAGGATGGGTGATGGTCCTGTTGAAAGGGTAGTGGAGAGAAGGCAGAGAAGGATGATTAAGAATAGAGAGTCAGCAGCAAGATCTAGAGCCAGAAAACAGGCATATACAGTTGAATTAGAAGCAGAACTGAACCAGTTAAGAGAAGAGAATTCTCAACTGAAACAAGCACTGGCCGAACTCGAGGCGAGAAGAAGACAGCAGTGTTTAGAGGAAACAAACGCGACGGTTCAAACCAAAGCTCAGAAAGCAAGAGAGAAACTGAGAGGCTTAAGAAGGAACACAAGCTGTCATCTGTGA 1269 0.4783 MMVREGEMNWQQGEVESLQREEEEAIRNDVNNVMSSSLGRQSSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQQQAGSNNNNNLSVIQKGISKQVSLPRQNSLSIPAPLCRKTVEQVWSEIHREQQQQQQLHHNSNVAHNTESTPRQPTFGEMTLEDFLVKAGVVREQQAAMQVAMAPPAVSSHRPQQHYTALYPNNTATMAQAAPFAIGGGGGNVVVPTYQAVAQGGGAVGEPSGSGYPGNSKRDNIGTGYPAPPAVCFGGRVVNGGVGGYGMPVAQTMGMGGPVSPVSSDGIGNENSGGQFGLDMSGLRGRKRMGDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELEARRRQQCLEETNATVQTKAQKAREKLRGLRRNTSCHL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0792 422 Pfam bZIP transcription factor 337 387 IPR004827 GO:0003700|GO:0006355
Psa3g0792 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 335 385 IPR004827 GO:0003700|GO:0006355
Psa3g0792 422 Gene3D - 335 390 - -
Psa3g0792 422 SUPERFAMILY Leucine zipper domain 337 386 IPR046347 GO:0003700|GO:0006355
Psa3g0792 422 MobiDBLite consensus disorder prediction 133 156 - -
Psa3g0792 422 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 9 421 IPR043452 GO:0003700|GO:0045893
Psa3g0792 422 SMART brlzneu 332 398 IPR004827 GO:0003700|GO:0006355
Psa3g0792 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 340 355 IPR004827 GO:0003700|GO:0006355
Psa3g0792 422 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 9 421 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Psa3g0792 422 Coils Coil 353 417 - -
Psa3g0792 422 CDD bZIP_plant_BZIP46 342 391 - -
Psa3g0792 422 MobiDBLite consensus disorder prediction 402 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0792 Psa-Chr3 69890003 69891538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0792 1 392 bZIP Transcription Factor Family AT2G36270 47.534 2.24e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g0792 bZIP_1 4.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0792 K14432 - gmx:100790948 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0792 3 69890003 69891538 Psa3g0792 3 69890003 69891538 ECH