Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0758 ATGGATTCATTAAGCCCTGCCGTCTTTGTCAATGTGCAACTGTTACCCTTCTGTGTTGGAAGAAGGGTTCGTACAGTGATACAAGTCGTGCGATCTGAGGGTTTAGTTGTCATTGGAAAATCACCGGATGAGAAGCAGATTATTGTAAAAGTATCACCTGATTCACCCCTACCATCTCCTCTTACAGCTTTTGTAGAAGTTATTGGCATCGTTAACAGTGACAAGTCCATCAAAGCTGAGTTATGGACCAACTTTGGGGATGAAATTGATATGTTCAGCTACCATAAGCTTTGTCAGCTTGCAAATGGAGAATTCAGACACTTGTTCCTGTGA 333 0.4204 MDSLSPAVFVNVQLLPFCVGRRVRTVIQVVRSEGLVVIGKSPDEKQIIVKVSPDSPLPSPLTAFVEVIGIVNSDKSIKAELWTNFGDEIDMFSYHKLCQLANGEFRHLFL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0758 110 Pfam Replication factor A protein 3 6 104 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Psa3g0758 110 CDD RPA3 6 102 - -
Psa3g0758 110 SUPERFAMILY Nucleic acid-binding proteins 6 109 IPR012340 -
Psa3g0758 110 Gene3D - 2 110 IPR012340 -
Psa3g0758 110 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 110 - -
Psa3g0758 110 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0758 Psa-Chr3 67566669 67568418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0758 1 110 Core DNA Replication Machinery Family AT4G18590 57.273 1.15e-41 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0758 K10740 - gmx:100306641 153.68