Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0749 ATGGAAAATATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAAGAGTTGATTACTTTCTATCTTCATAACATGCTTGAAGGAGAGAAACAATACATCATTCGAACTGTTATACCAGTCGTTAATATATACGACTATAATCCATCGCAACTCCCACAAATTTCTGGAGAGGCTAGTATGGAAGACAAGGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAGAGTGAAGTTAGAGGAGGAAGACCTAAGCGTCTTACAACAACTGGTTACTGGAAAGCCACTGGTTCTCCTAATCATGTTTATTCTTCTGATAATCACGTAATCGGCCATTCAAGATGA 339 0.3953 MENMPPGYRFYPTEEELITFYLHNMLEGEKQYIIRTVIPVVNIYDYNPSQLPQISGEASMEDKEQWFFFIPRQESEVRGGRPKRLTTTGYWKATGSPNHVYSSDNHVIGHSR* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0749 112 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 112 - -
Psa3g0749 112 Pfam No apical meristem (NAM) protein 5 109 IPR003441 GO:0003677|GO:0006355
Psa3g0749 112 SUPERFAMILY NAC domain 2 110 IPR036093 GO:0003677|GO:0006355
Psa3g0749 112 ProSiteProfiles NAC domain profile. 4 112 IPR003441 GO:0003677|GO:0006355
Psa3g0749 112 Gene3D NAC domain 13 112 IPR036093 GO:0003677|GO:0006355
Psa3g0749 112 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0749 Psa-Chr3 67045624 67046146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0749 7 112 NAC Transcription Factor Family AT5G22380 56.604 1.08e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa3g0749 NAM 9.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0749 - - gmx:100800056 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0749 3 67045624 67046146 Psa3g0749 3 67045624 67046146 ECH