Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0711 ATGGTGAAGAAAAAAACATTGAACCTCTCTTCTCTTCTCAAAAACACAGACCTCAAATATTCATCTTCATGGCCATGGCCTTATTGTCACCAACCAAAAACACTTTCTTTCAGAGCTGAAAATAACCAAGATGACATTAACAACACATTCAAAATCATCAACTCGGCTTACTTGGAGCCTTCCGATGAATCTGTTTCTCCGAATGCTTCTCTTGGTGAATCCGGAAAAACCGATTCGACAGAACCCGTGATTCGCGGGTTACCGTCTGATCGGTTTTTCTTTGAGCCGGATGAGACTAACTCTATTTTAGAAGCTAATAGTAAAGTGGTTGCACAAAGTGAAACTACTCAAGGTTTGCCTTTCAAAGATAGTGTTGTGTTGTCTATGGAATCTCAAGATCCTTATGTGGATTTTCGAAAGTCTATGGAGGAAATGGTGGAAGCTCATGAGGTTAAAGATTGGGAGTGTCTTCAAGGACTTTTGTGTTGGTATTTGAAGGTCAATGAGAAAAACAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTCGACTTCATCTTCATTTTCTTCTTCGTCTTCATCGTCTTCTCATTCTCCTTTTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCCTCTTATAGCACTCGGTGTGCTTCGTGTTCTATGGCTCGTGAAGAAGAGGTCGATACTCCTAGTTCATCTTTGTTGTTAGAACAAGTTAGGGAGGAATCTGATGGCGAAAATGAAGTTGAAGTTTCAGATATCAAAGCTTCAACTTCATCTTCGTCATCATCAACATCAAATAGTTATTAA 840 0.3869 MVKKKTLNLSSLLKNTDLKYSSSWPWPYCHQPKTLSFRAENNQDDINNTFKIINSAYLEPSDESVSPNASLGESGKTDSTEPVIRGLPSDRFFFEPDETNSILEANSKVVAQSETTQGLPFKDSVVLSMESQDPYVDFRKSMEEMVEAHEVKDWECLQGLLCWYLKVNEKNNHGYIVGAFVDLLVGLAFASTSSSFSSSSSSSSHSPFSPLSFYSSSLSSSYSTRCASCSMAREEEVDTPSSSLLLEQVREESDGENEVEVSDIKASTSSSSSSTSNSY* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0711 279 Pfam Transcriptional repressor, ovate 131 187 IPR006458 -
Psa3g0711 279 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 9 230 - -
Psa3g0711 279 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 125 188 IPR006458 -
Psa3g0711 279 MobiDBLite consensus disorder prediction 61 81 - -
Psa3g0711 279 MobiDBLite consensus disorder prediction 61 77 - -
Psa3g0711 279 ProSiteProfiles OVATE domain profile. 127 186 IPR006458 -
Psa3g0711 279 MobiDBLite consensus disorder prediction 262 279 - -
Psa3g0711 279 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 230 IPR038933 GO:0045892
Psa3g0711 279 MobiDBLite consensus disorder prediction 233 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0711 Psa-Chr3 63236486 63238198 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa3g0711 Ovate 5.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0711 - - ccaj:109813992 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0711 3 63236486 63238198 Psa6g5272 6 463891419 463892899 ECH
Psa3g0711 3 63236486 63238198 Psa3g0711 3 63236486 63238198 ECH