Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0710 ATGTCTAGCTCCAGAAAGAAGGTTCATCTGAACACTGTATCTGTGAAACTAGGCTGTGGAAGCTGCAGAAGACTAAAACTAAGCAACATTTTCAACCCAAAACCCAAACCCAAAAACCCCACTTACCAAAAACACAAACTTTACAATAACCACTACTCTTCTTCCTCAGGTCCTTGGAATGAAGACAAATACGACACTACAAGCACCACAAACACCAACACTGCCACCACATTCTCCCCTCTCTACTCCTCAAACCTTTCTGATTCAGAAACCTCCGCGAAGGAGCAGAGAAGAGTTGGAGGTTTAGGAAGAGGTGGAGGAGGAGAAGGTGTGGCTGTCGAGAAAGACTCTGAAGACCCTTATCTTGATTTCAGACACTCCATGCTACAGATGATATTGGAGAATGAGATATACTCTAAGGATGATCTTAGAGAGCTTCTCAACTGTTTTCTTCAGCTGAATGCACCTTATCATCACGGTGTTATCGTTAGAGCTTTTACTGAGATTTGGAATGGTGTTTCTGATAAGAGATCTAGCTCACACAGGGTTCATACAAACCGTACCCGTAAGCCACGTGAATATTAA 585 0.4291 MSSSRKKVHLNTVSVKLGCGSCRRLKLSNIFNPKPKPKNPTYQKHKLYNNHYSSSSGPWNEDKYDTTSTTNTNTATTFSPLYSSNLSDSETSAKEQRRVGGLGRGGGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIWNGVSDKRSSSHRVHTNRTRKPREY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0710 194 MobiDBLite consensus disorder prediction 53 110 - -
Psa3g0710 194 Pfam Transcriptional repressor, ovate 117 172 IPR006458 -
Psa3g0710 194 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 178 IPR038933 GO:0045892
Psa3g0710 194 MobiDBLite consensus disorder prediction 53 90 - -
Psa3g0710 194 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 178 - -
Psa3g0710 194 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 111 171 IPR006458 -
Psa3g0710 194 ProSiteProfiles OVATE domain profile. 113 172 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0710 Psa-Chr3 63109920 63111524 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa3g0710 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0710 - - mtr:MTR_7g105790 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0710 3 63109920 63111524 Psa3g0710 3 63109920 63111524 ECH