Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0705 ATGGGTAGGGAAAAGGTTCATATTAACATTGTGGTTATTGGCCATGTCGATCCTGGGAAGTCAGCTACTACCGGTCACTTGATCTACAAGCTTAGAGGTATTGACAAGCGTGTGATTGAGAGATTTGAAAAAGAAGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGCTCTTGACAAGCTCAAGGATGAAAGGGAAATAGGTATCACTATTGATATTTCCTTGTGGAAGTTTGAGACAACTGAGTACTATTGTACCGTCATTGATGCTCCTGGTCACAGAGATTTTATTAAGAATATGATTACTGGAACACCACAAGCTGATTGTGCTGTTTTCATAATTGACACCACTACACCCAAGTACTCAAAGAGTAGGTATGATGAATTTATCAAGGAAGTTCCTTCCTATAAAAAGGAGGTTGGCACAACAACGGCAGTCAAAGACATGGATTCCTTTGTCTGTCAAAGATACATATCTCATAGATATGACATTTCATAA 504 0.3929 MGREKVHINIVVIGHVDPGKSATTGHLIYKLRGIDKRVIERFEKEAAEMNKRSFKYAWALDKLKDEREIGITIDISLWKFETTEYYCTVIDAPGHRDFIKNMITGTPQADCAVFIIDTTTPKYSKSRYDEFIKEVPSYKKEVGTTTAVKDMDSFVCQRYISHRYDIS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0705 167 Pfam Elongation factor Tu GTP binding domain 6 119 IPR000795 GO:0003924|GO:0005525
Psa3g0705 167 Gene3D - 1 148 IPR027417 -
Psa3g0705 167 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Psa3g0705 167 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Psa3g0705 167 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Psa3g0705 167 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Psa3g0705 167 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 120 - -
Psa3g0705 167 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 116 144 - -
Psa3g0705 167 PANTHER TRANSLATION FACTOR 116 144 - -
Psa3g0705 167 PANTHER TRANSLATION FACTOR 1 120 - -
Psa3g0705 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 121 IPR027417 -
Psa3g0705 167 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 167 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0705 Psa-Chr3 62686819 62687322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0705 1 143 Eukaryotic Initiation Factors Gene Family AT1G07930 68.681 1.02e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0705 K03231 - vvi:100244821 240.736