Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0697 ATGGTTCTCAATTTCACAGCACGCAACCCAAACAAAAAACTCAGCATCTATTACGACAAAGTTGAGGCTCTAGCGTTCTACGAAGGATCCAGGCTTACTAATAATGTTGATGTGATCACACACATGAACTCGTTTCGCCAATATAAGAAGAGCACTGACCCGATGAGCGTTGTTTTCTCAGGACAAAAACTGATGGTTCTCGACAACGATCAAGTCTCAGAGTTGAACGAAGATAAGAGTGCTGAGGTTTATGATATCTATGTGAAACTCTATTTCAGGATTAGATTCAGACTTGGAGATTTGATATCTGGTGATTACAAGCCCAAGGTGAAATGTGATCTCAAAGTCCCTTTGAATTCTAACAAGACCGCTGCAACGTTTGTGCCCACCAAGTGCAGTGTTGATTTCTACTGA 414 0.413 MVLNFTARNPNKKLSIYYDKVEALAFYEGSRLTNNVDVITHMNSFRQYKKSTDPMSVVFSGQKLMVLDNDQVSELNEDKSAEVYDIYVKLYFRIRFRLGDLISGDYKPKVKCDLKVPLNSNKTAATFVPTKCSVDFY* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0697 137 Pfam Late embryogenesis abundant protein 5 110 IPR004864 -
Psa3g0697 137 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 134 - -
Psa3g0697 137 PANTHER OS05G0367900 PROTEIN 1 134 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0697 Psa-Chr3 62273515 62274358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0697 1 125 SNARE and Associated Proteins AT1G32270 32.031 9.53e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0697 - - gmx:100807701 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0697 3 62273515 62274358 Psa6g2919 6 242620294 242621937 PCT