Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa3g0685 | ATGAACCACCACACATCACCACTCCTCCTCCTTCTCATCCTCCTACCTTCTCTTGTCCTCACAACCACCCACCCAAACGACCTCAAATTCCTCAACCAATTTAGAAACAACCTCGACAACCCCGAACTCCTACAATGGCCAACACAATCTCCCGACAACGACCCATGTTCCACTCCATCTTGGAAATTCATCTTCTGCCAAAACGACAGAGTCACTCAGATTCAAACCAAAAACCTTAATCTCTCCGGCACCTTACCTCAAAACCTCAACGAACTCACAGAACTCTTCAACATAGGTCTCCAGAACAACAAACTCCACGGTCCTCTACCGTCGCTAAAAGGCTTAACAAATCTCAAATACGCTTTCTTCGACAACAACGAATTCGATTCCATCCCAAACGATTTCTTCCAAGGGCTATCGAGTTTGGAAACTCTCGCATTGGATGACAATAACCTCAATGTCTCTACAAATGGTTGGCAATTTCCTTCTTCTTTGCAGGATTCACCTCAGTTGACAAATCTTTCTTGCATGAGCTGTAATTTGGCTGGTTCTTTGCCGGATTTTCTTGGGAAAATGAACTCTCTTTCGTTTTTGAAGCTTTCTGGTAACAGTTTAAAGGGTGAGATTCCGTTGAGTCTTAATGGTTCTGGTTTGCAGACTCTTTGGTTGAATAACCAGAAGGGTGAGGGTGAGTCACTTTCTGGGAGTATTGATGTTGTTGCTACTATGGTTTCTTTGACTAGTTTATGGCTTCATGGAAACAGGTTCACCGGTTCGATTCCGGAGAATATCGGAGACTTGGTTTCTCTTAAGGAACTTAACCTCAATGGCAATGATCTTGTTGGGCTTGTTCCTAGTTCTTTAGGGGATATGGAGTTGGATAGTCTTGATTTGAATAATAACAGGTTTATGGGTCCAATCCCAAATTTTAAAGCTTTGAAAGTTAGTTATAGTAACAATGATTTTTGTTTAAATGAAACTGGTGTTCCTTGTTCTTTTGAAGTTATGGCTCTTTTAGGGTTTTTGGGTGGGTTGAATTATCCTTCAAATTTAGTTGATTCATGGAGTGGGAATAGCCCTTGTGAAGGACCATGGTTGGGGATAAAATGCAATGCGGATGGTAAAGTTTCGATGATTGATTTGCCGCGTTTTAATCTTAGTGGTACTTTGAGTCCTTCTGTTGCGAATTTAGGTTCTTTAGTTGAAATCAGATTGGGGGGTAATCATATCGATGGCGTAGTGCCTAGTAATTGGACTAGTTTGATGAATCTGAAATTGTTGGATCTGAGTGACAATAATATTTCTCCACCTTTGCCGGTTTTTAGTAATGGATTGAAACCTATGGTTGATGGGAATTCTTTGTTGAATGGTGGTGGAACGGAAGGTCCTTCGTCGGGGAAAAACAGTCCGTCGGGTGGATCGGGGAATAACGGTGAAGGTACGAAGGGAGAGACGAATTCAAGTTCAGGTGATTCGGTTGAAACGAAAAAGTCCAAAAGGAAAAGCTTGGTTTTGATTGTAGCTCCCATTGCTGGTGTTGCGGCTGCTGCTTTTCTGTTGATTCCGCTTTATGCGTATTGTTTTAGGAGGACAAAGAATGGATTTCAGGCTCCAAGTTCACTCGTGGTTCACCCGAGAGATCCGTCTGATTCGGACAGTGCTGTAAAGATAGCTATTGTTAATAATACCAACGGAAGTGTTTCCACTTTGCCAGGGAGCGGGACTGGGAGTAGAAACAGCAGCGCGTTTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCGGTTCAAGTTCTAAGAAACGTGACAAAGAATTTCGCCCCTGAGAATGAGCTCGGCCGTGGCGGATTCGGAGTTGTTTATAAGGGAGAGTTGGACGACGGGACTAAGATTGCAGTAAAAAGAATGGAAGCAGGTGTGATAACCAATAAAGCATTGGATGAATTTCAAGCCGAAATTGCAGTTCTGTCAAAAGTTCGACATCGACATCTAGTGGCCCTTATAGGTTATTCCACCGAAGGTAACGAGAGAATTCTAGTGTACGAGTATATGCCACAAGGTGCTCTCAGTCAGCATCTTTTCCATTGGAAAAGCCTTGGACTCGAGCCTCTCTCGTGGAAGAGGAGGCTCAACATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTGGCTCATCAGAGCTTCATTCATAGGGATCTTAAGTCCTCAAATATTTTACTTGCCGATGATTTTAGAGCTAAAGTCTCGGATTTTGGATTGGTAAAACTTGCTCCTAATGGCGAAAAATCCGTAGTGACCAAACTTGCTGGGACCTTTGGATACTTGGCTCCTGAATATGCAGTGACAGGAAAAATCACAACCAAAGTAGATGTTTTCAGTTTCGGCGTTGTGTTAATGGAGCTGTTGTCTGGACTGATGGCACTTGATGAGGATAGACCCGAGGAAAGTCAATACTTGGCAGCATGGTTCTGGAATATAAAATCAGATAAGAATAAACTAATGGCTGCTATTGACCCAACTCTCGACATAAACGAAGAAACATTCGAGAGCGTCTCGATTATAGCCGAGCTAGCCGGACACTGCACAGCTAGAGAACCAAACCAGAGGCCAGAAATGGGGCATGCTGTCAACGTCCTTGCACCACTTGTTGAAAAATGGAAACCGTTTGACGACGACCCCGACGAGTATTCCGGCATCGACTACAGTCTTCCACTTAACCAAATGGTGAAGGGTTGGCAGGAGGCGGAAGGAAAAGACACGGGTTATATGGACTTAGAAGACAGTAAGAGTAGTATCCCCGCGAGACCTACTGGATTTGCAGATTCTTTTACTTCGACCGACGGCCGGTGA | 2865 | 0.437 | MNHHTSPLLLLLILLPSLVLTTTHPNDLKFLNQFRNNLDNPELLQWPTQSPDNDPCSTPSWKFIFCQNDRVTQIQTKNLNLSGTLPQNLNELTELFNIGLQNNKLHGPLPSLKGLTNLKYAFFDNNEFDSIPNDFFQGLSSLETLALDDNNLNVSTNGWQFPSSLQDSPQLTNLSCMSCNLAGSLPDFLGKMNSLSFLKLSGNSLKGEIPLSLNGSGLQTLWLNNQKGEGESLSGSIDVVATMVSLTSLWLHGNRFTGSIPENIGDLVSLKELNLNGNDLVGLVPSSLGDMELDSLDLNNNRFMGPIPNFKALKVSYSNNDFCLNETGVPCSFEVMALLGFLGGLNYPSNLVDSWSGNSPCEGPWLGIKCNADGKVSMIDLPRFNLSGTLSPSVANLGSLVEIRLGGNHIDGVVPSNWTSLMNLKLLDLSDNNISPPLPVFSNGLKPMVDGNSLLNGGGTEGPSSGKNSPSGGSGNNGEGTKGETNSSSGDSVETKKSKRKSLVLIVAPIAGVAAAAFLLIPLYAYCFRRTKNGFQAPSSLVVHPRDPSDSDSAVKIAIVNNTNGSVSTLPGSGTGSRNSSAFGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVITNKALDEFQAEIAVLSKVRHRHLVALIGYSTEGNERILVYEYMPQGALSQHLFHWKSLGLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLSGLMALDEDRPEESQYLAAWFWNIKSDKNKLMAAIDPTLDINEETFESVSIIAELAGHCTAREPNQRPEMGHAVNVLAPLVEKWKPFDDDPDEYSGIDYSLPLNQMVKGWQEAEGKDTGYMDLEDSKSSIPARPTGFADSFTSTDGR* | 955 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa3g0685 | 954 | Pfam | Leucine rich repeat | 245 | 303 | IPR001611 | GO:0005515 | |
Psa3g0685 | 954 | MobiDBLite | consensus disorder prediction | 459 | 495 | - | - | |
Psa3g0685 | 954 | Pfam | Leucine rich repeat N-terminal domain | 25 | 66 | IPR013210 | - | |
Psa3g0685 | 954 | Pfam | Leucine rich repeat N-terminal domain | 335 | 371 | IPR013210 | - | |
Psa3g0685 | 954 | Gene3D | Phosphorylase Kinase; domain 1 | 574 | 685 | - | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 267 | 290 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 243 | 266 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 421 | 443 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 397 | 420 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 115 | 138 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | LRR_typ_2 | 139 | 161 | IPR003591 | - | |
Psa3g0685 | 954 | SMART | serkin_6 | 608 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa3g0685 | 954 | MobiDBLite | consensus disorder prediction | 459 | 492 | - | - | |
Psa3g0685 | 954 | Gene3D | Ribonuclease Inhibitor | 25 | 329 | IPR032675 | - | |
Psa3g0685 | 954 | PANTHER | OSJNBA0070M12.3 PROTEIN | 8 | 954 | - | - | |
Psa3g0685 | 954 | ProSiteProfiles | Protein kinase domain profile. | 608 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa3g0685 | 954 | MobiDBLite | consensus disorder prediction | 925 | 954 | - | - | |
Psa3g0685 | 954 | Gene3D | Transferase(Phosphotransferase) domain 1 | 686 | 900 | - | - | |
Psa3g0685 | 954 | CDD | STKc_IRAK | 614 | 887 | - | - | |
Psa3g0685 | 954 | Pfam | Protein kinase domain | 611 | 882 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa3g0685 | 954 | MobiDBLite | consensus disorder prediction | 940 | 954 | - | - | |
Psa3g0685 | 954 | SUPERFAMILY | L domain-like | 334 | 443 | - | - | |
Psa3g0685 | 954 | PANTHER | RECEPTOR PROTEIN KINASE TMK1-LIKE | 8 | 954 | - | - | |
Psa3g0685 | 954 | SUPERFAMILY | L domain-like | 23 | 313 | - | - | |
Psa3g0685 | 954 | Gene3D | Ribonuclease Inhibitor | 333 | 456 | IPR032675 | - | |
Psa3g0685 | 954 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 733 | 745 | IPR008271 | GO:0004672|GO:0006468 | |
Psa3g0685 | 954 | ProSitePatterns | Protein kinases ATP-binding region signature. | 614 | 636 | IPR017441 | GO:0005524 | |
Psa3g0685 | 954 | SUPERFAMILY | Protein kinase-like (PK-like) | 586 | 884 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa3g0685 | Psa-Chr3 | 61137245 | 61141029 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa3g0685 | 81 | 889 | Receptor kinase-like Gene Family | AT5G07280 | 31.808 | 1.17e-81 | 286 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Psa3g0685 | Pkinase | 2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa3g0685 | - | - | gmx:100305366 | 1449.88 |