Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0648 ATGGAGGATGGGAATTATGCAAGTGGATTATGGAGAACGAAATCGGAGCAACTGGAATCAGTGGCGGAAGATTTGAACTCGACTCCGGGATCGAGCGAGTCGATAAGAGTGGCGGACGGTGGCAGCGGGAGTCTTACAAGGAAGTCGAGGAGAGCGTCGCCGGGAGGAAGAAACACACACATAAGGAAGGCGAGGAGCGTTCAAACGTCTTTGAAAGTTGAGTTGGATGAGGTTAATAGTGGTGCCGCTCTTAGCAGAGCTTCGAGTTTGGGACTCTCGTTCTCTTTTACTGGTTTTTCTGTTCCTCTTGATGAAATCAGTAGCTCCAAACCATTCAGCGATGACGAAGATATACCTGAGGATATTGAAGCTGGAATCCATAAGCCAAAGTTTCAAACTGAACCTACTCTCCCAATATATCTAAAGTTCACGGATGTGACATACAAGGTAGTGCTCAAAGGCATGACAAAGAGTGTTGACAAAGATATCTTGAAAGGGATCACTGGTTGTGTAAATCCAGGAGAAGTTTTAGCGTTGATGGGTCCCTCGGGAAGTGGAAAAACATCTTTGTTGAATCTAATTGGAGCTAGGTCACATCAACCAACAATTGGTGGATCTATTACTTACAATGATCAACCATATTCCAAGTTCCTAAAAAGCAGGATTGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACTTAACTGTCAAAGAAACATTGACATATGCAGCTCGTTTAAGGTTGCCGAAAACATTAACTAGAGAGCAGAAGGAAAAAAGAGCTTTAGATGTTATCTATGAGCTAGGCTTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCGTTTGTTCGAGGAGTATCTGGTGGAGAGAGGAAACGAGTTTGTATTGGCAATGAGATCATAATCAATCCTTCACTTTTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACTGCATTGAGAATAGTTCAAATGCTACATGACATAGCTGAGGCTGGTAAGACGATAGTGACAACAATCCACCAGCCATCAAGCAGACTATTTCACAAATTCGATAAGTTAATCCTTTTGGGAAAAGGGAACTTGCTTTTCTTTGGAAAAGCATCAGAAGCAATGGACTACTTCCAATTCATAGGGTGTTCTCCTCTCATTACCATGAACCCAGCAGAGTTTTTATTGGATCTTGCAAATGGAAACATGAGTGATATTTCTGTACCATCAGAGTTAGAGGATAAAGTTCATATCGAAAACGCAGAAGCTGAAACATCCAATGGGAAACCATCAGCCGCAGTTGTACAAGAGTATCTAGTGGAGGCATATGAGACTAAAGTAGCAGAAACTGAGAAGAAGAAAATATTGGTTCCGATTCCTCTTGATGAAGAAATGAAGTCTAAGGTTTATTCACGTGATAGACAGTGGGGAGCAAGTTGGTTAGAGCAATACTCAATATTGTTTTCTAGAGGATTCAAAGAACGTAGACATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACTGCAGTCATTCTAGGATTACTCTGGTGGCAATCAGATGCTAGCAACCCAAAGGGTCTTCAAGACCAGGCAGGATTGCTTTTCTTTATAGCGGTGTTTTGGGGATTTTTTCCTGTGTTCACTGCAATATTCACATTTCCTCAAGAAAGAGCAATGCTGAATAAGGAAAGAGCAACAGATATGTACAGATTAAGTGCATACTTTTTGGCTAGAACAACAAGTGACCTTCCATTAGACCTTGTATTACCAGTACTCTTCCTGCTAGTTGTTTATTTCATGGCTGGTTTGAGACTCAGTGCAGGACCCTTTTTCCTTAGTATCCTTACTGTTTTTCTCTGCATTGTAGCAGCTCAGGGACTCGGACTCGCTATCGGGGCGACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTCACTGTCATGACTTTCATGTTAGCTGGTGGTTTCTTTGTAAAGAATGTTCCTATATTTATATCTTGGATTCGGTATCTATCTTTCAACTACCACACATACAAGCTTTTGCTGAAGGTGCAATATGAACACATTACACCTAGCATAAATGGGATCAGAATTGACAGTGGTATGAATGAGGTTATTGCTTTGATAGCTATGGTATTTGGTTACCGTTTATTGGCCTATTTTTCTCTGAGGTGGATGAAAACTCAACCATAG 2208 0.4126 MEDGNYASGLWRTKSEQLESVAEDLNSTPGSSESIRVADGGSGSLTRKSRRASPGGRNTHIRKARSVQTSLKVELDEVNSGAALSRASSLGLSFSFTGFSVPLDEISSSKPFSDDEDIPEDIEAGIHKPKFQTEPTLPIYLKFTDVTYKVVLKGMTKSVDKDILKGITGCVNPGEVLALMGPSGSGKTSLLNLIGARSHQPTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTIVTTIHQPSSRLFHKFDKLILLGKGNLLFFGKASEAMDYFQFIGCSPLITMNPAEFLLDLANGNMSDISVPSELEDKVHIENAEAETSNGKPSAAVVQEYLVEAYETKVAETEKKKILVPIPLDEEMKSKVYSRDRQWGASWLEQYSILFSRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDASNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFLARTTSDLPLDLVLPVLFLLVVYFMAGLRLSAGPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKNVPIFISWIRYLSFNYHTYKLLLKVQYEHITPSINGIRIDSGMNEVIALIAMVFGYRLLAYFSLRWMKTQP* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0648 735 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 731 - -
Psa3g0648 735 SMART AAA_5 173 364 IPR003593 -
Psa3g0648 735 MobiDBLite consensus disorder prediction 20 63 - -
Psa3g0648 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 381 IPR027417 -
Psa3g0648 735 ProSitePatterns ABC transporters family signature. 287 301 IPR017871 GO:0005524
Psa3g0648 735 Pfam ABC transporter 164 315 IPR003439 GO:0005524
Psa3g0648 735 Gene3D - 140 381 IPR027417 -
Psa3g0648 735 MobiDBLite consensus disorder prediction 20 39 - -
Psa3g0648 735 CDD ABCG_EPDR 138 369 - -
Psa3g0648 735 Pfam ABC-2 type transporter 482 691 IPR013525 GO:0016020|GO:0140359
Psa3g0648 735 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 141 387 IPR003439 GO:0005524
Psa3g0648 735 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 32 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0648 Psa-Chr3 58215014 58220238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0648 127 416 Calmodulin-binding Proteins AT2G36910 28.000 8.71e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0648 3 58215014 58220238 Psa3g0648 3 58215014 58220238 ECH