Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0642 ATGAAAATGGACAAGTATAAGAAGGCTGCAAGGGCTGTTCTGACTCCTAAAGTTGTGTCTGCTAGAGGGAGTAGGAAAGTGAAATTGGTGGGAAAGTATTCTATGAAAATGGACAAGTATAAGAAGGTTGCAAGGGCTGTTCTGACTCCTAAAGTTGGGTATGGTTTGGCTGATGAGCTGAAAAGGGCAGGGTTTTGGGTTCAAACCGTGTTGGATAGGCCGCAAGCTGCAGATGTTGCGCTGCAAAAGCATATGGTGGATATGATGGATCACAGGCGGGTTGAGTGCGTGGTCCTTGTATCGGAAGATTCTGATTTTGTTGATGTGATAAAGGAAGCAAAGTTGCGATGTCTCAAGACTGTTGTTATTGGGGATATTAGTAGTAACGGAGTCTTGAAAAGGACTGCCGATACTGCATTTTCCTGGGAGGAAATTTTGATGGGGAAGGCTAAGAAGGAGGATGTATCGGTTATGGAAAATTGGAAAGATCGTGATATATTGAAAAGGTTGGAGTGGACGTACAATCCAGATGTGGATATTTTCTTTGAGTTGTACCTACTACGTCTACGACTTCGTAGACCAGATGATGATATTGAAGATATCTATGATGAAATTGATAATGACTACAATGATGACAAAGGTTCTTGGTGGAAATTAGGCTCTGATGATAATGATGTTACAAATTGA 687 0.4148 MKMDKYKKAARAVLTPKVVSARGSRKVKLVGKYSMKMDKYKKVARAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADVALQKHMVDMMDHRRVECVVLVSEDSDFVDVIKEAKLRCLKTVVIGDISSNGVLKRTADTAFSWEEILMGKAKKEDVSVMENWKDRDILKRLEWTYNPDVDIFFELYLLRLRLRRPDDDIEDIYDEIDNDYNDDKGSWWKLGSDDNDVTN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0642 228 PANTHER - 18 226 - -
Psa3g0642 228 Pfam NYN domain 55 140 IPR021139 GO:0004540
Psa3g0642 228 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 18 226 - -
Psa3g0642 228 Gene3D - 18 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0642 Psa-Chr3 57932717 57934375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0642 17 179 C2H2 Transcription Factor Family AT4G12240 64.417 4.11e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0642 - - lja:Lj3g3v3326020.1 303.138