Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0635 ATGAGAGGAGCCAGGTTGATATCATTGTTCTCGCGCTGCCGGACGTTGATGATTCATAACTATTCTCCCTTGTTTCGTGCTACAACCATTTTCACCAACCACCTGCATCCTTCTAACTCTCAATGCCGATTCTTCAACTCTTCTTCTTCTACTTCATCACCATCACCTTCCTCTAACAAGCTCTTCGTAGGAGGTCTATCATGGTCAGTTGATGAAAAATCCCTCAAAGATGCTTTCTCTTCCTTTGGAGAAGTCACTGAAGTGAGGATAGTGTATGATAAAGACAGTGGTAGAGCTAGAGGCTTTGGATTTGTTATCTTTTCAAATGAAGATGATGCAAAATCGGCAAAACATGCAATGGACGGAAAGGCACTGTTAGGTAGACCCTTGAGAATAAATTTTGCTCTCGAAAAGGCTCGTGGTGTACCTGTTGTAGTTCCTCGGTTTTCTGATATTGGAAACTTAAACAGGCGCTGA 477 0.4256 MRGARLISLFSRCRTLMIHNYSPLFRATTIFTNHLHPSNSQCRFFNSSSSTSSPSPSSNKLFVGGLSWSVDEKSLKDAFSSFGEVTEVRIVYDKDSGRARGFGFVIFSNEDDAKSAKHAMDGKALLGRPLRINFALEKARGVPVVVPRFSDIGNLNRR* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0635 158 Gene3D - 35 141 IPR012677 -
Psa3g0635 158 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 61 131 IPR000504 GO:0003723
Psa3g0635 158 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 59 137 IPR000504 GO:0003723
Psa3g0635 158 SUPERFAMILY RNA-binding domain, RBD 43 141 IPR035979 GO:0003676
Psa3g0635 158 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL 26 154 - -
Psa3g0635 158 SMART rrm1_1 60 133 IPR000504 GO:0003723
Psa3g0635 158 PANTHER TRANSFORMER-2-RELATED 26 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0635 Psa-Chr3 57096995 57098946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0635 57 138 C2H2 Transcription Factor Family AT2G19380 37.805 1.11e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0635 - - cam:101502883 206.838