Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0599 ATGAGATTCTTCCTTGTAGCTTCTATGATGCTTCTCAGTTTCCTTGAGAAAAGTGAAGGAGGCAGTCTCAGGAAGAATTTCTATAAGAAATCATGTCCTCAAGCTGAGGAGATTGTGAAAAATATAACCCTACAGCATGTTTCTTCAAGGCCTGAGCTTCCAGCCAAGTTGCTAAGATTGCATTTTCATGACTGTTTTGTTAGGTTTAATAATGTACGAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTCTCCAAAAGCTTGGAAGCACTCATCAATATCCCAGCACCTTTCCATAACATCTCAACACTCAGACAAATCTTTTCTAGTAAAAATCTTACTCTTCATGACTTGGTCGTATTATCAGGAGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTACTTTGGATTCAACTTATGCCAAATTATTGAAGACCAAGTGCCAAGGTTTAGGTGACACCACCACAACGGTGGAGATGGATCCTAATAGTTCAACAGACTTTAACAATGACTATTATCCTATCCTTTTACGGAAGAAGGGTCTATTCACATCAGATGCTACTCTTCTCACAACCAAACAATCAAGAAACATTGTTAAAGAATTGGTTTCACAAAACAAATTCTTCACTGAGTTTGCTCAGTCAATGAAGAGGATGGGAGCCATTGGTGTTCTCTCTGGTTCTGATGGAGAGATTAGGAGGAAATGCTCTATTGTTAATTAA 777 0.39 MRFFLVASMMLLSFLEKSEGGSLRKNFYKKSCPQAEEIVKNITLQHVSSRPELPAKLLRLHFHDCFVRFNNVRKWEVLTGRRDGTVSKSLEALINIPAPFHNISTLRQIFSSKNLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPTLDSTYAKLLKTKCQGLGDTTTTVEMDPNSSTDFNNDYYPILLRKKGLFTSDATLLTTKQSRNIVKELVSQNKFFTEFAQSMKRMGAIGVLSGSDGEIRRKCSIVN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0599 258 Pfam Peroxidase 73 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Psa3g0599 258 ProSiteProfiles Plant heme peroxidase family profile. 55 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PANTHER PEROXIDASE 74 257 - -
Psa3g0599 258 PANTHER PEROXIDASE 3 68 - -
Psa3g0599 258 Gene3D - 71 258 - -
Psa3g0599 258 Gene3D - 23 69 - -
Psa3g0599 258 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PANTHER PEROXIDASE 25-RELATED 74 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 PANTHER PEROXIDASE 25-RELATED 3 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 SUPERFAMILY Heme-dependent peroxidases 23 258 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa3g0599 258 CDD secretory_peroxidase 23 257 IPR033905 GO:0004601|GO:0042744
Psa3g0599 258 Gene3D Peroxidase, domain 2 97 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0599 Psa-Chr3 53654216 53655648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0599 2 258 Peroxidase AT4G11290 38.769 5.31e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0599 K00430 - gmx:100799691 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0599 3 53654216 53655648 Psa3g0599 3 53654216 53655648 ECH
Psa3g0599 3 53654216 53655648 Psa6g3857 6 335875220 335876598 PCT