Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0578 ATGTTGATCAGAAACGTCACCGTCAAAACTCCTCAAGAAGACACTCACCTAGACAACTTGAAATCCGATTTGGCTGAGTTCATCCCCACTTTCATCTTTGTCTTTGCTGGTTCAGGTTCTTACATCGCTTATAACAAGCTTAGCGACAACGGTGCCGCCACTCTTGCCGGTCTCATCTCGGTTTCCATAACACACGCTTCACTCTCGTTGTTCTTGTCTCATTCGGTGCTAACATTGCTGGTGGACACGCCATCCCCTCTATCTCCTTCATTGCTTTCGTCGGGGGAAATATCATCATCGCTCAACTCCTTGGATCCATCGTCGCCTGCACATTCCTCCTCTTTGTCACCGCATCGGTATGACTCATATTTTCTATAA 378 0.4709 MLIRNVTVKTPQEDTHLDNLKSDLAEFIPTFIFVFAGSGSYIAYNKLSDNGAATLAGLISVSITHASLSLFLSHSVLTLLVDTPSPLSPSLLSSGEISSSLNSLDPSSPAHSSSLSPHRYDSYFL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0578 125 PANTHER AQUAPORIN-8 1 76 IPR034294 -
Psa3g0578 125 SUPERFAMILY Aquaporin-like 14 68 IPR023271 -
Psa3g0578 125 PANTHER AQUAPORIN TIP1-1 1 76 - -
Psa3g0578 125 Gene3D Glycerol uptake facilitator protein. 4 81 IPR023271 -
Psa3g0578 125 Pfam Major intrinsic protein 16 67 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0578 Psa-Chr3 52583749 52584126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0578 1 76 Major Intrinsic Protein MIP AT2G36830 52.632 2.62e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0578 K09873 - gmx:100527509 96.2857