Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0565 GAGCCGGAATTTTGGCAAGATCTCGAAGGGCTGTTTTGTTGGATATTAAGTGGGCATGCCTAGAATCTTTGCTGTCAATTCCTTCTCATGCTCTCAAAAATGGGATTCATTTGGAGGAAAACTACACTTTCTTCTCAAATGACACTCTGAGATGCATTTTTGGTGATCTTGTTGAGAGCCTTGAAAATGCGGGAGAAAGTTCTGTTTTATCCATGCTGAGATCACTCAGAATGTTATTTGAGCTAGTTGCCAAAGTGACACCAAGTGCGGTTGTTTCCTGTAGTCATGTGATAGATGCACAGGTTATTTGGAATTTGGTGCATTCATCTTGGATATTACATATAAATTACAACAAGCGAAGAGTTGCTTCGATTGCTGCTCTTTTGTCATCTGTTTTACATCCTTTATTATTTAATGATGAGAGCATGCATCAAAGAGACAATGCACCAGGGCCACTGAAATGGTTTATTGAAAATCTTATTGAGGAAGGCAGAAAGAGTCCTCGGACAATTCGACTTGCAGCGTTGCACTTAACAGGGTTATGGCTCTTAAATCCTATAATTATAAAGTTTTATTTGAAAGAGCTTAAACTGCTCTCCCTATACGGTTCAGTTGCATTTGATGAGGATTTTGAAGAGTTGTATGCACGTGTATCGGTTGCTGTTCTGTTTTACAAGTTGGCAGACTTGGCCTGTATGGTGGGATCACCAAATGAAGACGTAGATTGTATGGCAGCATTAGATTCTGGCAGATCATTTCTGCTAGAGCTTCTTGACTCTGCGGTCAATGATAAAGATCTCGCTAAGGAGTTATACAAAAAATATAGTTCTATTCATAGGCACTGTCCCTCGGGCAATTGGCTAATTCCCAAATGTTGCATCACTATGAGTTGGAAAATAATAAAACACTGCATGAAAATCAGCTTGTTAATTCTCAAGAACACTATGGACTTGTCAATGCTAACATCATACCCAGCTATGAGATATCTTCAAGCCGCAGCTGGACACAGAAGTATGCCATGGGATGCTCATTTGGCTAGGTTTCAAATTTTGCAATTTAGGGACAGGCTGGAAACATTGTTTGGAATAAACATGGGCAGATTTTTTGTGCAGGAATACAACAAATTCTATATTATACCTATTAATGAGGCTGATGTTATTATACAGAAACAGAAAAAAATTGTGTTTGAAAGAGACAAAATTCAGACGGTTAAAGATGCTACAATTGTCATACAATCAGTCATTCGTGAACGGTTGGTAAGAAGATGCTCTGGGGATATTGGATTTTTGAAACATGGGCAACGTTACAGTGATGCATTGCCAGGCTCATGTTGTGAAGCGAATCGTCGGGCGTATAACAGCTCGCTAATTCCACCATCGTCGAATCAACATCATATTCACCTATTTGAGATTCTCTCTTGGATCAATTCACTTCTTCAACTCAATCTCTCCAAAGTCGAAAAGGCTTGTTCTAGTGCGGTTCACTGTCAGTTTCTTGTTGCCGCTCGTCCTGGAATTGTTCCGATGCATAAGGTCAATTTTGATGCCAAGAGTGGGTATGAGATGACCCAGTCTTTGTTAAGTGTGACAAATATATCAAGTTTCTTAGCTGGTGTTCTAGCATGGAAAGATCCACATATTTTGGTTCATGCCTTGCAAATTGCGGAAATTCTTATGGAAAAGCTTCCAGATACATTCTCTAAGATGTTTGTCAGTATCACTGCTACACAAAACTCTTGGGAAGAAGGCTTCATGCACACCCTTGCAATCCTTAAGATTCTTAAAGAAAGGTTAAATGAACTTCCTTACATAGTCTTACAACATCAAGCATTAGAACTATGCGCCAAGAAAGTTGATGCAGCTTCTGGAGATATGCGAAATGCTCTTTCCATATGCAGGAGTGCAATTGAGATGTTAGAAGCAGAAATTAGAGACTCTATTTCCAATGTGAATGCTTCAGAAGAGAAATCATCATCAGAATAA 1982 0.3925 AGILARSRRAVLLDIKWACLESLLSIPSHALKNGIHLEENYTFFSNDTLRCIFGDLVESLENAGESSVLSMLRSLRMLFELVAKVTPSAVVSCSHVIDAQVIWNLVHSSWILHINYNKRRVASIAALLSSVLHPLLFNDESMHQRDNAPGPLKWFIENLIEEGRKSPRTIRLAALHLTGLWLLNPIIIKFYLKELKLLSLYGSVAFDEDFEELYARVSVAVLFYKLADLACMVGSPNEDVDCMAALDSGRSFLLELLDSAVNDKDLAKELYKKYSSIHRHCPSGNWLIPKCCITMSWKIIKHCMKISLLILKNTMDLSMLTSYPAMRYLQAAAGHRSMPWDAHLARFQILQFRDRLETLFGINMGRFFVQEYNKFYIIPINEADVIIQKQKKIVFERDKIQTVKDATIVIQSVIRERLVRRCSGDIGFLKHGQRYSDALPGSCCEANRRAYNSSLIPPSSNQHHIHLFEILSWINSLLQLNLSKVEKACSSAVHCQFLVAARPGIVPMHKVNFDAKSGYEMTQSLLSVTNISSFLAGVLAWKDPHILVHALQIAEILMEKLPDTFSKMFVSITATQNSWEEGFMHTLAILKILKERLNELPYIVLQHQALELCAKKVDAASGDMRNALSICRSAIEMLEAEIRDSISNVNASEEKSSSE* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0565 659 Gene3D - 585 659 - -
Psa3g0565 659 Coils Coil 635 655 - -
Psa3g0565 659 Gene3D - 454 534 IPR036872 -
Psa3g0565 659 PANTHER RNA METHYLTRANSFERASE 10 279 IPR045330 -
Psa3g0565 659 SUPERFAMILY Calponin-homology domain, CH-domain 463 523 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0565 Psa-Chr3 50899499 50902013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0565 589 646 Core DNA Replication Machinery Family AT2G29680 63.793 1.88e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0565 K15333 - gmx:100809637 436.802