Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0562 ATGGCTTTAGAAACAAAAGAAGAAGAAGAGATAGTTGTGATGAACATGGATAATTTTCAAGAGATCCATGTTTCTAATCATCCCACTATACCACAACTCCAAAACCAGAAACATCAAAAGTTTCGAAGAAATGATTCTCTTGAGATTGAATCTCGCACAACCTCTCACGTCCATCACTCTAACGGTTCATCCATGGCGATAATACTGCAACTGGCGTTTCAAAGTCTCGGAATAGTTTACGGAGACATCGGAACTTCTCCGTTGTATGTGTTTTCAAGCGTCTTTCCGGACGGTATAAAGCACAACGATGATATATTAGGAGTTCTTTCCTTAATCTTCTATACACTCACTCTCATTTCTCTTCTCAAATATGTGTTCGTCGTCCTAAGAGCCACCGATAATGGAGATGGTGGAACATTTGCTTTGTACTCTCTGATATGCCGATACGCGAAAGTGGGACTAATTCCGAATCAACAACTAGAGGATGCAGAGGTGTCTAATTATAAGCTGAAATTGCCAAACAACCGTGAAAAGAGAGCATCAAAGCTTAAATCTATGCTTGAGAACAGTCACGGTACCAAGATCTTTCTCTTATTTACTACTTTGCTCGGCACTTCCATGGTCATCGGTGATGGTGTTCTCACACCTTGCATATCTGTTTTATCTGCAGTGGGAGGGATCAAGGAAGCTGCTAGCAAAATAACTGAGGATCAAATTGTTTGGATATCAGTGGCAATCTTGATTGTTCTTTTTATGGTTCAGAGATTTGGAACTGATAAAGTTGGTTACAGTTTTGCTCCCATAATCTGTATATGGTTCGCTCTTATTGCCGGGATTGGCGTGTACAATTTCATCAAGCATGATACGTCGGTTATAAAAGCCTTGAATCCGAAATACATAGTAGATTATTTCATCAGGAATAAAAAGGAAGCTTGGATTTCTCTTGGTGGCGTTGTTCTCTGTACAACAGGAACTGAAGCATTATTTGCTGATGTTGGACATTTCACAGTTCGGTCTATACAGATAAGTATGTGTTGTGTTACTTATCCTGCTCTTATTTTGGCTTATGCCGGACAAGCCTCGTTTCTTCGCAAAAACAACGATCTTGTTAGTGCCACATTCTATAAGTCCATACCAGGCCCTATGTATTGGCCAATGTTTGTGGTTGCTGTTTTGGCAGCAATAATAGCTTCTCAAGCCATGATCTCAGGGACTTTTTCTATAATCCAACAATCTCTATCCTTAGGATGTTTTCCTCGGGTGCAAATTATACATACATCGGAAAAGTATGAAGGACAAGTTTATATTCCAGAAGTTATAGCCATGATCTCAGGGACTTTTTCTATAATCCAACAATCTCTATCCTTAGGATGTTTTCCTCGGGTGCAAATTATACATACATCGGAAAAGTATGAAGGACAAGTTTATATTCCAGAAGTTAATTACATCCTCATGATTGCTTGTATTGCTATCACTGTTGGTTTTAAAACCACCACAAAAATTGGAAATGCCTATGGGATAGCAGTGGTATTTGTGATGACACTAACATCTGCATTTCTCACACTAATCATGATCGTGATATGGAAGACTCACATGCTTTTGATCATTAGCTATATTCTCATCATTGGTTCGGTGGAACTTGTTTATTTAAGCTCGGTATTATACAAATTTGACCAAGGAGGGTATCTTCCTCTTGCATTTTCTGCAATTCTAATGTTCATCATGTACGTTTGGAATACTGTGTACCGAAGAAAGTACTTTTACGAACTTGATCACAAGATTTCATCTGAAAAGTTCAGAGAAGTTGCTTGTGACACAAGTTTATGCCGATTTCCGAGTCTCGCAATGTTTTACTCTGAGCTTGTTCAAGGTATTCCACCAATTTTCAAGCATTATGTTGCAAATGTTCCTGCACTACACTCTGTCCTTGTCTTTGTTTCCATTAAATCATTGCCTATTAGCAAAGTCCCAATTGGAGAAAGGTTCCTTTTTCGTCGAGTACAACCTAAAGAATTCTATGTATTCCGATGTGTTGTTAGATATGGATACACTGATGTCCGCAACGAGAAAGAGCCTTTTGAAAAGTTAATGGTTGAGAGGTTGAAGGAGTTTATTGTTAAGGAATATTATTGGTCTCAAAAAACTATACAAGATGGTGAAACTGATGAAAATTTGAATGTTGATAAATCACAAGAAATTAGTTACGAAGAAAGAGTCCAAGAGGCAATTGAAAAAGAGATTGAGACAATTGAGAAAGCATCAAGAGTTGGTGTTGTCCATTTGATCGGTGAAAATGAGGTGATTGCTAGTAAAGGAGCTGGTTTTGGAAAAAGAATTTTGATTGATTATGCCTACAATTTTTTGAAGAAAAACTTGAGACAGAGTGAAAAGTTATTTGACATTCCTCACAAACGTATGGTCAAAGTTGGAATGACTTATGAATTATAA 2448 0.3779 MALETKEEEEIVVMNMDNFQEIHVSNHPTIPQLQNQKHQKFRRNDSLEIESRTTSHVHHSNGSSMAIILQLAFQSLGIVYGDIGTSPLYVFSSVFPDGIKHNDDILGVLSLIFYTLTLISLLKYVFVVLRATDNGDGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYKLKLPNNREKRASKLKSMLENSHGTKIFLLFTTLLGTSMVIGDGVLTPCISVLSAVGGIKEAASKITEDQIVWISVAILIVLFMVQRFGTDKVGYSFAPIICIWFALIAGIGVYNFIKHDTSVIKALNPKYIVDYFIRNKKEAWISLGGVVLCTTGTEALFADVGHFTVRSIQISMCCVTYPALILAYAGQASFLRKNNDLVSATFYKSIPGPMYWPMFVVAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVQIIHTSEKYEGQVYIPEVIAMISGTFSIIQQSLSLGCFPRVQIIHTSEKYEGQVYIPEVNYILMIACIAITVGFKTTTKIGNAYGIAVVFVMTLTSAFLTLIMIVIWKTHMLLIISYILIIGSVELVYLSSVLYKFDQGGYLPLAFSAILMFIMYVWNTVYRRKYFYELDHKISSEKFREVACDTSLCRFPSLAMFYSELVQGIPPIFKHYVANVPALHSVLVFVSIKSLPISKVPIGERFLFRRVQPKEFYVFRCVVRYGYTDVRNEKEPFEKLMVERLKEFIVKEYYWSQKTIQDGETDENLNVDKSQEISYEERVQEAIEKEIETIEKASRVGVVHLIGENEVIASKGAGFGKRILIDYAYNFLKKNLRQSEKLFDIPHKRMVKVGMTYEL* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0562 815 PANTHER POTASSIUM TRANSPORTER 441 814 - -
Psa3g0562 815 PANTHER POTASSIUM TRANSPORTER 32 439 - -
Psa3g0562 815 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 441 814 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0562 815 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 32 439 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0562 815 Pfam K+ potassium transporter 441 685 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0562 815 Pfam K+ potassium transporter 72 439 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0562 815 TIGRFAM kup: potassium uptake protein 71 439 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0562 Psa-Chr3 50757974 50761018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0562 24 815 Inorganic Solute Cotransporters AT4G13420 51.100 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0562 K03549 - pop:7491314 1100.5