Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0560 ATGAAGGGAAAAACCCCAAAACCTACGAAAGTTAGGGGAAGAAAAAAGCTATCAAATGGAAGAAACACGTTGCAGCTTCATTTCAGCAAATTCTCTCTCAATCAATACAAACCATTACCAACAACAGCTTGTCCTTCTAACACCTTTTCTCGCCTCCGGAGCATGATCGAAGCCGAGGCCAACGATAGCCCTGCCATTTGCGTAAGGGATACAGACGAAGCTGCCGAAACGGATTCAAGAGATTGTATTCTCAGTCAAGATTTGTTTTGTTCTCCAGATTATTTAACCCCGGAGAATCAACAGATTTTTAACTGTTTGGCATTTAACAAGGATAATAGCCCTTGCCCTAGATCACCGGAGAAATTGACGACAGCGAGAAACAAGAGATGTAGGCTAGATGATGTCTACGGAAAATCTCTTAGCCCTACCATTTTTAATGACCATCAACAAGATGTGGAACTTGATAAGGACTCTGCTGCAGAGGAAGTTTCTCTTGCAGATGAAGTTTCTCTTGATAAATTAATAGTAGCTGGTAAACCAAATCCCCAGAATTATGTGTCACAATCTGCAGCTGCATTGCGTTGCAGGGCTATGCCTCCTCCTTGCTATAGGAACCCCTATTTAAAAGATGTTTCACAAAAGGAGACAGATCCCTTTGCAAACCAAAGATCCAAATGCGCAGGGTTCTTCCCTAAATTTACAGCTAATGAGGGTCTCTCACGCTATCACACTGATTTTGAAGAGCTTGAGCAAATTGGTAGAGGGAACTTTAGTTGTGTCTTTAAAGTATTAAAGCGAATAGATGGCTGCCTGTATGCTGTGAAACGCAGCACTAGACAGTTACACCTGGAAACAGAAAGGAAAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTGGGTTCTCATGAGAATATTGTGGGGTATTATTCTTCATGGCTTGAAAGTGAACAGCTGTACATTCAGATGGAGATATGTGATCATAGCTTATTCAAATTCAAAGGCTCTGAGTTATTATCAGAAGGACAACTCTTAGAAGTTTTATACCAGGTTGCCAATGCACTGCGATTTATACACGAGAAGGGAATAGTTCATCTTGACGTTAAGCCTGATAATATTTATGTTAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTATTGATAATAGCCTTCCAATCGAGGAAGGAGATGCGCGTTATATGCCCCAGGAAATCCTCAATGAGAAATATGATCACCTTGACAAGGTTGATATTTTCTCGCTGGGAGCTTCTATTTATGAGCTTGTTCGAAAATCACCTTTGCCAGAATCACGATGTCACTTTTCCAATCTAAAAGAGGGCAAGCTGTCACTCCTTCCTAGCAATACAATGCAATTTCAAAACTTGCTCAAGGCCATGATTGATCGTGATCCAGTAAAGAGGCCGTCTGCCAGAGAGTTAGTAGAGAACCCAATTTTTGACAGGGTGTTAAGAACAGTGAAAAATTGA 1500 0.4087 MKGKTPKPTKVRGRKKLSNGRNTLQLHFSKFSLNQYKPLPTTACPSNTFSRLRSMIEAEANDSPAICVRDTDEAAETDSRDCILSQDLFCSPDYLTPENQQIFNCLAFNKDNSPCPRSPEKLTTARNKRCRLDDVYGKSLSPTIFNDHQQDVELDKDSAAEEVSLADEVSLDKLIVAGKPNPQNYVSQSAAALRCRAMPPPCYRNPYLKDVSQKETDPFANQRSKCAGFFPKFTANEGLSRYHTDFEELEQIGRGNFSCVFKVLKRIDGCLYAVKRSTRQLHLETERKKALMEVQALAALGSHENIVGYYSSWLESEQLYIQMEICDHSLFKFKGSELLSEGQLLEVLYQVANALRFIHEKGIVHLDVKPDNIYVKNGVYKLGDFGCATLIDNSLPIEEGDARYMPQEILNEKYDHLDKVDIFSLGASIYELVRKSPLPESRCHFSNLKEGKLSLLPSNTMQFQNLLKAMIDRDPVKRPSARELVENPIFDRVLRTVKN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0560 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 417 493 - -
Psa3g0560 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 77 404 - -
Psa3g0560 499 PANTHER BNAA08G27310D PROTEIN 417 493 - -
Psa3g0560 499 PANTHER BNAA08G27310D PROTEIN 77 404 - -
Psa3g0560 499 Pfam Protein kinase domain 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0560 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Psa3g0560 499 Gene3D Transferase(Phosphotransferase) domain 1 327 494 - -
Psa3g0560 499 ProSiteProfiles Protein kinase domain profile. 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0560 499 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Psa3g0560 499 SUPERFAMILY Protein kinase-like (PK-like) 238 492 IPR011009 -
Psa3g0560 499 Gene3D Phosphorylase Kinase; domain 1 235 326 - -
Psa3g0560 499 SMART serkin_6 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0560 Psa-Chr3 50738321 50743013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0560 2 493 Core Cell Cycle Gene Families AT1G02970 55.622 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Psa3g0560 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0560 K06632 - gmx:547742 645.966