Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0546 ATGCCTTTAGAAGAAGAAGCCGTGGTTGTCGACATGGACAACATAGAAAAGAATAACCATCCTACTCGAAGGTATAAAAGAAATGATTCTCTAGAAATCGAAGCTCGAACCCCCTCTCACTCCCGTGACCCGAAAGGAGAATCAACTACCTTAATGCTACAACTGGCATTTCAAAGTCTCGGAATAGTTTACGGAGACATTGGAACCTCGCCAATGTATGTGCTTTCAAGTGTCTTCCCACAGGGTATAAAGAACAACGATGATGTCTTGGGTGTTTTTTCTTTAATCTTTTACACGCTCACTCTCATTCCTTTGATCAAGTATGTTTTCTTCGTCCTAAGGGCAACCGATAACGGCGATGGTGGAACATTTGCTTTGTATTCTCTCCTATGCCGTTACGCCAAAGTGGGACTTCTTCCGAATAAACAAGAAGAGGACGCACAAGTGTCTAATTATCAGCTGAAATTGCCAAACAACCGTGAAAAGATGGCATCAAAGCTTAAATCTATGCTTGAGAACAGTCACTGTACGAAGGCTTTCCTCTTAATTGCTACTTTGCTCGGAACTTCCATGGTCATCGGTGACGGTGTTCTTACCCCTTGCATATCTGTATTATCCGCTGTTGGAGGGATCAAGGAAGCTGCTAGCAGCATAACTGAGAATCAAATTGTTTGGATATCAGTGGCAATCTTGATTCTTCTTTTTATGGTTCAGAGATTTGGAACTGATAAAGTTGGTTACAGTTTTGCTCCCATAATCTGTATATGGTTCGCTCTCATTGCCGGGATTGGCCTATACAATTTCATCAAGTATGATGCATCAGTTATAAAAGGATTAAATCCAAAATACATAGTAGATTATTTCGTCAGGAACAAAAAAGAAGCATGGATTTCTCTTGGTGGCATTGTTCTCTGTACAACAGGAGCTGAAGCGTTATTTGCTGATGTTGGACATTTCACAGTTCGGTCTATACAGATAAGTATGTGTTGTGTTACTTATCCTGCTCTTATTTTTGCTTATGCTGGACAAGCCGCATTTCTTCGCAAAAACAACGATCTTGTTAGTGCCACATTCTTTAAGTCCATACCAGGCCCTATGTATTGGCCAATGTTTGTGGTTGCTGTTTTGGCTGCAATAATAGCATCTCAAGCCATGATCTCAGGGACTTTTTCTATAATCCAACAATCTCTATCCTTAGGATGTTTTCCTCGGGTGCAAATTATACATACATCGGAAAAGTATGAAGGACAAGTTTATATTCCAGAAGTTATAGCCATGATCTCAGGGACTTTTTCTATAATCCAACAATCTCTATCCTTAGGATGTTTTCCTCGGGTGCAAATTATACATACATCGGAAAAGTATGAAGGACAAGTTTATATTCCAGAAGTTAATTACTTCCTCATGATTGCTTGTATTGCCATCACTATTGGATTTAAAACCACAACAGAAATCGGCAATGCCTATGGGATAGCAGTGGTGTTTGTGATGACACTAACATCTGCTTTTCTGATACTAATCATGGTCTTGATATGGAACACTCACATAATACTGGTCATCGCCTATGCTCTCATCATTGGTTCAGTGGAGCTTATTTATTTAAGTTCAGTCTTATACAAATTTGACCAAGGAGGTTATCTTCCTCTTGCATTCGCGGTGTTGCTAATGTTCATTATGCTTATTTGGAATAACGTGTATCGGAAGAAATACTATTATGAACTCGATCACAAGATTTCTCAAGAGAAACTCAGAGACATTGCTTGTGACACAAGTTTATGCCGATTACCAGGGCTTGCAATGTTTTACTCAGAGCTTGTTCAAGGTATTCCGCCAATTTTCGAGCACTTTATTCAAAATGTACCTGCACTTCATTCCGTCCTTGTCTTTGTTACAATCAAATCTTTGCCTATTAGTAAAATCCAAAGAGAGGAAAGGTTTCTCTTTCGCCGAGTGCAGCCTAAAGAGCTCAATGTATTCCGATGTGTTGTTAGATATGGATACACCGATGTCCGCAATGAGCAAGAGCCTTTTGAGAAGCTAATGCTTGAGAGGTTAAAGGAGTTTATTGTCAATGAAAATTATTGTTTACAAGATGTTAGTGATGGTGAAGCTAAAGTACAAGAGGGAGCTGAAAAAGAGATTGAAATAATTGAACAAGCATCAAGGGCAGGTGTTGTTCACTTGGTTGGTGAAAATGAGGTGATTGCTAGGAAAGGAGCTGGCATATGGAGGAGGATTATGATTGATTATTCTTACAACTTTTTGAAGAAAAACTTGAGGGAGACTGAAAAACTATTTGATATTCCTCAACAACGTATGGTCAAAGTGGGAATGACTTATGAACTATAA 2349 0.3917 MPLEEEAVVVDMDNIEKNNHPTRRYKRNDSLEIEARTPSHSRDPKGESTTLMLQLAFQSLGIVYGDIGTSPMYVLSSVFPQGIKNNDDVLGVFSLIFYTLTLIPLIKYVFFVLRATDNGDGGTFALYSLLCRYAKVGLLPNKQEEDAQVSNYQLKLPNNREKMASKLKSMLENSHCTKAFLLIATLLGTSMVIGDGVLTPCISVLSAVGGIKEAASSITENQIVWISVAILILLFMVQRFGTDKVGYSFAPIICIWFALIAGIGLYNFIKYDASVIKGLNPKYIVDYFVRNKKEAWISLGGIVLCTTGAEALFADVGHFTVRSIQISMCCVTYPALIFAYAGQAAFLRKNNDLVSATFFKSIPGPMYWPMFVVAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVQIIHTSEKYEGQVYIPEVIAMISGTFSIIQQSLSLGCFPRVQIIHTSEKYEGQVYIPEVNYFLMIACIAITIGFKTTTEIGNAYGIAVVFVMTLTSAFLILIMVLIWNTHIILVIAYALIIGSVELIYLSSVLYKFDQGGYLPLAFAVLLMFIMLIWNNVYRKKYYYELDHKISQEKLRDIACDTSLCRLPGLAMFYSELVQGIPPIFEHFIQNVPALHSVLVFVTIKSLPISKIQREERFLFRRVQPKELNVFRCVVRYGYTDVRNEQEPFEKLMLERLKEFIVNENYCLQDVSDGEAKVQEGAEKEIEIIEQASRAGVVHLVGENEVIARKGAGIWRRIMIDYSYNFLKKNLRETEKLFDIPQQRMVKVGMTYEL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0546 782 MobiDBLite consensus disorder prediction 23 47 - -
Psa3g0546 782 Pfam K+ potassium transporter 425 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0546 782 Pfam K+ potassium transporter 56 423 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0546 782 TIGRFAM kup: potassium uptake protein 55 423 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0546 782 PANTHER POTASSIUM TRANSPORTER 14 425 - -
Psa3g0546 782 PANTHER POTASSIUM TRANSPORTER 425 780 - -
Psa3g0546 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 425 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0546 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 425 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa3g0546 782 MobiDBLite consensus disorder prediction 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0546 Psa-Chr3 49669886 49672881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0546 12 782 Inorganic Solute Cotransporters AT4G13420 48.603 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0546 K03549 - pop:7491314 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0546 3 49669886 49672881 Psa3g0546 3 49669886 49672881 ECH