Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0545 ATGGATAATACACGTTTGGCTCTTGCATCCATTGGTAAGCTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAACGGTTTGCCTTCAAATCTCTCTGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAAGGATCTGAAATTGCCATGGCTTCTTATTGTTCCGAGTTACAATACCTTGCAAATCCCGTCACAACTCATGTTCAAAGTGCCGAGCAACACAACCAAGATGTCAACTCCTTGGGTTTGATTTCCTCTAGGAAAACATATGAAGCCGTTGAGATCCTTCAGCTCATGTCTTCCACATTCTTGATTGCGCTTTGCCAAGCAATTGACTTAAGACATTTGGAAGAGAACTTGAAAAACTCAGTTAAGAACATCGTAAGCCAAGTTGCTAAACGGACCCTTACAACTGGTGTGAATGGAGAACTCCATCCTTCAAGGTTTTGTGAAAAGGACTTGTTGAGAGTGGTTGATAGGGAGCACGTGTTTGCCTATATTGATGATCCTTGTAGTGCTGCATATCCATTGATGCAAAAACTAAGGCAGGTGTTGGTGGATCATGCATTAGTAAATGGAGAAAACGAGAAGAATTTGAGCACGTCAATCTTCCAAAAGATTGCAACTTTTGAGGATGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGGCTGCGTATGAGAGTGGAAATCCTAGAGTTCCAAACAAGATCAACGGATGCAGATCTTATCCACTGTACAAGTTTGTGAGAGAAGAGTTGGGGACTGGTTTGCTAACAGGAGAAAATGTGATTTCACCGGGGGAGGAGTGTGATAAACTATTCACAGCTATTTGCCAAGGAAAAATCATTGATCCCCTTCTTAAATGCTTGGGAGAATGGAACGGTGCTCCTCTTCCTATTTGTTAA 927 0.4164 MDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAVEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSAAYPLMQKLRQVLVDHALVNGENEKNLSTSIFQKIATFEDELKTLLPKEVESARAAYESGNPRVPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEECDKLFTAICQGKIIDPLLKCLGEWNGAPLPIC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0545 308 PANTHER HISTIDINE AMMONIA-LYASE 1 308 IPR001106 -
Psa3g0545 308 Pfam Aromatic amino acid lyase 1 133 IPR001106 -
Psa3g0545 308 Gene3D Fumarase/aspartase (Central domain) 1 303 - -
Psa3g0545 308 Gene3D - 121 242 IPR023144 -
Psa3g0545 308 PANTHER PHENYLALANINE AMMONIA-LYASE 1 308 - -
Psa3g0545 308 SUPERFAMILY L-aspartase-like 1 308 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0545 Psa-Chr3 49558335 49559664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0545 1 308 Monolignol Biosynthesis Gene Families AT2G37040 81.169 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0545 K10775 - gmx:100302735 560.066