Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0543 ATGGAAGCAGTAGCAGCAGCCATTACAAAAAACAGCAACGGTTATGATTCATTCTGCTTGACCAATGCTAAAAATAATAATATGAAAGTGAATACTGCCGATCCTTTGAATTGGGGTGTGGCCGCCGAGGCAATGAAAGGAAGCCACTTGGATGAAGTGAAACGCATGGTGGAGGAGTACCGGAAGCCGATTGTTCGTCTTGGTGGCGAGACTCTCACCATTTCTCAGGTTGCTGCCATTGCCGCACATGACCATGGTGTGAAAGTTGACTTGTCCGAATCTGCTAGAGCTGGCGTTAAGGCCAGCAGTGACTGGGTGATGGAGAGTATGAATAAAGGCACAGACAGTTACGGTGTCACCACCGGTTTCGGCGCCACCTCACATCGCCGTACCAAACAAGGAGGTGCTCTGCAGAAAGAACTCATCAGGTTTTTGAATGCCGGAATATTTGGAAGTGGAACCGAGTCAAACCACACACTGCCACATACTGCAACAAGAGCCGCCATGTTAGTCCGAATCAACACACTTCTCCAAGGCTATTCTGGTATTCGATTTGAAATCTTGGAAGCCATAACCAAGCTCATTAACAGCAACATCACCCCGTGTTTACCACTTCGAGGTACTATCACTGCTTCCGGTGATTTAGTCCCTCTTTCTTACATTGCTGGTTTACTAACAGGAAGACCGAATTCCAAAGCTCATGGACCTTCTGGAGAAATACTTAATGCCAAACAAGCTTTTCAATTGGCTGGAATCGATTCTGATTTCTTCCAGTTACAACCAAAAGAAGGACTTGCACTTGTTAATGGAACTGCTGTTGGTTCTGGTTTGGCTTCTATTGTTCTATTTGAATCTAACATCTTGGCTGTCTTGTCTGAAGTCCTATCTGCTATTTTCGCCGAAGTTATGCAAGGCAAACCCGAATTTACGGATCACTTGACACACAAGTTAAAGCATCACCCTGGTCAAATTGAAGCTGCTGCTATTATGGAACATATTCTGGATGGAAGTGCATATGTCAAAGCGGCCAAGAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATAGATATGCACTTAGAACTTCGCCACAATGGCTTGGTCCTCTCATTGAAGTCATTCGATTCTCTACCAAATCTATTGAGAGAGAAATTAACTCTGTTAATGATAACCCCTTGATTGATGTTTCAAGAAACAAGGCTTTGCATGGTGGGAATTTTCAAGGAACGCCTATTGGAGTTTCCATGGATAATACACGTTTGGCTCTTGCATCCATTGGTAAGCTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAACGGTTTGCCTTCAAATCTCTCTGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAAGGATCTGAAATTGCCATGGCTTCTTATTGTTCCGAGTTACAATACCTTGCAAATCCCGTCACAACTCATGTTCAAAGTGCCGAGCAACACAACCAAGATGTCAACTCCTTGGGTTTGATTTCCTCTAGGAAAACATATGAAGCCGTTGAGATCCTTCAGCTCATGTCTTCCACATTCTTGATTGCGCTTTGCCAAGCAATTGACTTAAGACATTTGGAAGAGAACTTGAAAAACTCAGTTAAGAACATCGTAAGCCAAGTTGCTAAACGGACCCTTACAACTGGTGTGAATGGAGAACTCCATCCTTCAAGGTTTTGTGAAAAGGACTTGTTGAGAGTGGTTGATAGGGAGCACGTGTTTGCCTATATTGATGATCCTTGTAGTGCTGCATATCCATTGATGCAAAAACTAAGGCAGGTGTTGGTGGATCATGCATTAGTAAATGGAGAAAACGAGAAGAATTTGAGCACGTCAATCTTCCAAAAGATTGCAACTTTTGAGGATGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGCTGCGTATGAGAGTGGAAATCCTAGAGTTCCAAACAAGATCAACGGATGCAGATCTTATCCACTGTACAAGTTTGTGA 2019 0.4314 MEAVAAAITKNSNGYDSFCLTNAKNNNMKVNTADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPIVRLGGETLTISQVAAIAAHDHGVKVDLSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAKQAFQLAGIDSDFFQLQPKEGLALVNGTAVGSGLASIVLFESNILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAVEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSAAYPLMQKLRQVLVDHALVNGENEKNLSTSIFQKIATFEDELKTLLPKEVESARLRMRVEILEFQTRSTDADLIHCTSL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0543 672 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 34 649 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa3g0543 672 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 207 223 IPR022313 GO:0016841
Psa3g0543 672 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 25 650 - -
Psa3g0543 672 Gene3D Fumarase/aspartase (Central domain) 272 537 - -
Psa3g0543 672 SUPERFAMILY L-aspartase-like 34 652 IPR008948 GO:0003824
Psa3g0543 672 Gene3D - 538 653 IPR023144 -
Psa3g0543 672 Pfam Aromatic amino acid lyase 72 550 IPR001106 -
Psa3g0543 672 PANTHER HISTIDINE AMMONIA-LYASE 25 650 IPR001106 -
Psa3g0543 672 CDD PAL-HAL 70 535 IPR001106 -
Psa3g0543 672 Gene3D - 24 271 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0543 Psa-Chr3 49542676 49545888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0543 11 647 Monolignol Biosynthesis Gene Families AT2G37040 82.759 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0543 K10775 - gmx:100803857 1141.33