Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0538 ATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGTAAGAAAGAATCTCGGGAGATCAGTGCTTTATTTGGCGTAACAGTATCACAGGTGCGTGATTTTTTCACTAGTCAACGTTCAAGAGTGAGGAAACTAGTTCAGTTGTCAAGGGAGAAGGCATTAAAATCTAATTCTTGTGCCGAGTCTCTTGATGTGCAAATGAACTCTGATCCCGTGAGATCAATAAATCCAGCTCCCTTAAACTCAGATGGTGCCATCAATGTGGAAGAAGCATCCTGTTCAACACAGGAAGCAGCTCTTTCTGACCTGGACGACTTAGATAAACAATTTGTCGAGAACATTTTTGGACTAATGCAGAAAGAGGAAACATTTTGTGGACAGGAGAAGTTGATGGAGTGGATATTGTCAATACAGAACTTTTCCGTCTTGTTATGGTTTTTGACCGGGGGAGGTGCTATAACTTTAGCAAATTGGTTGACTAAAGCTGCTGTTGAAGAGCAAACGAGTGTACTGCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAGGCCCTTCCTGCACACATATCAGCTTTATTGCAGAGTGTTAATAGACTACGGTTCTACAGGACATCAGACATATCTAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTGTTAACAAGGAACCAAGCCATAAAGAAACCCAATGGTGTTAAGCCTTCCTATGATGGTCAAAAAGAGACGTTACTTTCTCAGAGTATTGGTCAAATAATCGGCCCTGAATCATGGCATTTTAATGTTCCTGAAGACATTCTTGCTCTCTCGAATGAGTTTTCAGATAATTTCAGGAAAATGGGATCTCAATCTGTGAAATTATCGCTGCCCAGCTCAGATGATTGTAATAAGAAACCTCCCCTTGGTGTATCTTCATCTCAATCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGATCGATGAGTAGAAGTCCACATGTGGCAAGGTCAGGGTCGGTAAGTCAAGGCCGTCCTATGTCCGCCGATGATATCCAGAAAGCAAAAATGCGTGCGTTATTTATGCAGAGTAAGCATGGGAAAACTGCTTTGAAAGAAAATAAAGAAGCAAAAATCAGAAGTCTGAGTAAATCTCCGAAGGCCAGTATTGCAGTTTGCTCTTCTAAAGTTCCAGCGCCACTCAAAATTGAAGAAGAGAAGAAGCCTCTGTTGTTTTCCTCTAAAACCACTAATAGGCTGGAAGCTTCTTATTCTAAACTGACAACGGATTTGAAGGAAACTCTCCCGGAGAAGTGCAAGAGGGTGAAAATCTTCTGGAAAACACCAGCAGAGGTAAAACTCAACGATAGGTGGAGAGTTGGTGCTGGTCAAAATAGCAAAGAGGTCCATATCCAAGAAAACAGAAACCGCAGGGACAAAGAAGCTATTTATCAGACAGCACGAGAAATGCCCTCTAACCCCAAGGAGCCTTGGGATTTTGAAATGGACTATGACGACTCTTTGACACTGGAAATTCCTATTGAACAGCTACCAGATAGTGATGATCCAGAAATAGTAGATGCATCCAATGAAGTTGCAACTGCAACTCACCCTGCTGTTCAAGGGGTGGCCTCATCTTCAGCCAGTAATGCAGCCACTGCTGAACCTGATTTAGAGTTGCTGGCCGTACTGCTAAAAAATCCAGACTTGGTATTTGCCTTAACTTCTGGACAAATTGGCAACATCTCAAATGAGGAAACCTTGAAGCTGCTTGACATGATCAAGAGAGGCAGCGTGAACACAGGATTAAGTGAAAATGCAAATAGAAACTACGGTACTAGTTCAATGGCCCCTGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTCAAGCAATCCAAGCACGAGTGGATGCAGCATAGAAGCACCAAAGAATCCTTTTACAAGGCAAAACTTAGCACCTGATAGACGAAGTTTCCAGAGCTCTTCTTCAATTGCAACTGCCAACTTATCATCTCAGATTTCAGCAACTAGTACTACAGTAAGGCAACAACATACATTTGTTCCGTTTTCAAAGCAGCTCCCTGGCACAGCAGTTTCCACATATTCACTACCTCAGGCAAATAATAATATTCATGAAAAACAACCACTTCACTCTCTTTCCTCAGTCTATGCACAAACACCATTCTCTGATAGAGGTTTAGCTATGAACAACTCAATCACTGCCGATGTCTCTCCAGTTGGCACACATACACATGCAATGCGGGTTGATGGCATAAGTAATATAAAACCAGTAGCACCTAATTCTACTATGCAAGAGGGTTTGCCTAATTCATTCCCACAATCCTTCACGTTGAACTCACCAACAACATCACGCACAGCCGCACAACAACAAAGAAATACGCATATGATGCCCCACCAGCCCCATTTTTCTGAACCATCTTACCATAACACTGTCCGTCCTTATCAACCACAGTTCGAAAAATCAGTTCCTGCATCAGATTACCGGAGAGTTAGGCAGGATATGCCACCGAGTTATCATTCTCAACGAAATCATGATAACTATAACACATTGGTTGGGGGATCCACGCCATCTGGTTCTTGGGATAGAAACAATCATGAAAGAGGGGGATTTGAAACATGGAGTCCAGAGAATAGTCCAACTAGGAATCCTAGGTATGTTCAAGGTAGGAATCTCCCAGATTCCAGAACGAATCATGTAAGAAATAATAGACCTGAATGGTCAAGGCAGCGGGGTTCTTCTGGACATTGGAACCCTGGTAGGCATGAGAACAGAAAGTGGAATGATCAGAGACGATAA 2811 0.424 MQSVFSIKDAISKKESREISALFGVTVSQVRDFFTSQRSRVRKLVQLSREKALKSNSCAESLDVQMNSDPVRSINPAPLNSDGAINVEEASCSTQEAALSDLDDLDKQFVENIFGLMQKEETFCGQEKLMEWILSIQNFSVLLWFLTGGGAITLANWLTKAAVEEQTSVLLLILKVLCHLPLHKALPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKPSYDGQKETLLSQSIGQIIGPESWHFNVPEDILALSNEFSDNFRKMGSQSVKLSLPSSDDCNKKPPLGVSSSQSRERRKVQLVEQPGSMSRSPHVARSGSVSQGRPMSADDIQKAKMRALFMQSKHGKTALKENKEAKIRSLSKSPKASIAVCSSKVPAPLKIEEEKKPLLFSSKTTNRLEASYSKLTTDLKETLPEKCKRVKIFWKTPAEVKLNDRWRVGAGQNSKEVHIQENRNRRDKEAIYQTAREMPSNPKEPWDFEMDYDDSLTLEIPIEQLPDSDDPEIVDASNEVATATHPAVQGVASSSASNAATAEPDLELLAVLLKNPDLVFALTSGQIGNISNEETLKLLDMIKRGSVNTGLSENANRNYGTSSMAPEKVEVSLPSPTPSSNPSTSGCSIEAPKNPFTRQNLAPDRRSFQSSSSIATANLSSQISATSTTVRQQHTFVPFSKQLPGTAVSTYSLPQANNNIHEKQPLHSLSSVYAQTPFSDRGLAMNNSITADVSPVGTHTHAMRVDGISNIKPVAPNSTMQEGLPNSFPQSFTLNSPTTSRTAAQQQRNTHMMPHQPHFSEPSYHNTVRPYQPQFEKSVPASDYRRVRQDMPPSYHSQRNHDNYNTLVGGSTPSGSWDRNNHERGGFETWSPENSPTRNPRYVQGRNLPDSRTNHVRNNRPEWSRQRGSSGHWNPGRHENRKWNDQRR* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0538 936 MobiDBLite consensus disorder prediction 875 900 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 779 803 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 621 642 - -
Psa3g0538 936 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 936 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 321 343 - -
Psa3g0538 936 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 936 - -
Psa3g0538 936 ProSiteProfiles 'Homeobox' domain profile. 1 44 IPR001356 GO:0003677
Psa3g0538 936 MobiDBLite consensus disorder prediction 874 936 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 920 936 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 601 642 - -
Psa3g0538 936 MobiDBLite consensus disorder prediction 290 343 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0538 391 648 Homeobox Transcription Factor Family AT4G02560 45.349 1.81e-50 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0538 - - gmx:100806633 1196.03