Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0523 ATGGCTCAAATTCCAGAGAAGCAAGTGATGGTGGTTGCCATCGACGACAGCGATTATAGTACCTACGCTCTTGAATGGACTTTGGATCATTTGGTTACACCATTAACAAATCCAATCTTCAAACTTGTTCTTGTTCATGCAAAACCTTCTGTTAGTGCTAGTGTTGGATTCGTTGGACCTGGAGCTGCTGAGGTGCTGCCTATTGTGGATGCCGACTTGAAAAGAACTGCTGTGTTGGTTATTGAACGAGCGAGAGAAATCTGCACCAAAAGATCGGTAAAAGACATATTTGTGGAAACCGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTGGAGAAGCACCATGCTTCAATATTGGTTGTTGGTAGTCATGGTTATGGAACTTTAAAAAGGGCGGTTTTAGGCAGTGTGAGTGACTATTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAAACCAAACATTGA 486 0.4259 MAQIPEKQVMVVAIDDSDYSTYALEWTLDHLVTPLTNPIFKLVLVHAKPSVSASVGFVGPGAAEVLPIVDADLKRTAVLVIERAREICTKRSVKDIFVETVEGDPRNVLCDAVEKHHASILVVGSHGYGTLKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0523 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 161 - -
Psa3g0523 161 Gene3D HUPs 3 161 IPR014729 -
Psa3g0523 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Psa3g0523 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Psa3g0523 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Psa3g0523 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 157 - -
Psa3g0523 161 CDD USP_Like 10 154 - -
Psa3g0523 161 Pfam Universal stress protein family 9 155 IPR006016 -
Psa3g0523 161 PANTHER - 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0523 Psa-Chr3 49009566 49010365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0523 - - gmx:100306046 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0523 3 49009566 49010365 Psa3g0523 3 49009566 49010365 ECH
Psa6g3808 6 330635096 330636698 Psa3g0523 3 49009566 49010365 PCT