Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0519 ATGTTCATAACATTACGCCTTATGTTACTACTAATAATATCAATACTTCTTTCACTCTCAACAAATACTAGCCAAATGGTATATCCAAAAGGAAACAACAATAACAACAATAATGTTAAGGAAGCATGTAGTGTCACAAGGTACAAAAACCTATGCATCCACACACTAGCACAATTCTCTAACACGGCAGGAAGAACCCCGAGCAAGTGGGCGCGTGTGGGCGTATCCGTTACAATAAGCGAAGTTAAGAATGTTCGAGCATATCTTACGAAGTTAAAGACGCGCGGGGACATGAAAGGAAGAAACAAAGTCGCGCTTTCGGATTGTATAGAAACTTTTGGTTATGCGCTCGACGAGCTTCACAAATCACTAGGTGTGCTTAGAAGGTTAAGCAAAAAGACTTTTAGCACACAAATGGGAGATCTTAATACATGGATTAGTTCAGCGCTTACCGATGAAGATACTTGTCTTGATGGATTTGAAGGTGAGAATGAGAGGCAAATTAAATTACTGCGAAATAAGGTTCAGAATGTTTCTTATATAACAAGTAACGCTCTTGCTCTTGTTAACAAACTTGCTTCTACAGGTTTAGACAGTAGTATGACTTATCCATAG 615 0.387 MFITLRLMLLLIISILLSLSTNTSQMVYPKGNNNNNNNVKEACSVTRYKNLCIHTLAQFSNTAGRTPSKWARVGVSVTISEVKNVRAYLTKLKTRGDMKGRNKVALSDCIETFGYALDELHKSLGVLRRLSKKTFSTQMGDLNTWISSALTDEDTCLDGFEGENERQIKLLRNKVQNVSYITSNALALVNKLASTGLDSSMTYP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0519 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 187 - -
Psa3g0519 204 SMART PMEI_2 34 188 IPR006501 GO:0004857
Psa3g0519 204 CDD PMEI-like_3 42 194 - -
Psa3g0519 204 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Psa3g0519 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 193 IPR035513 -
Psa3g0519 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Psa3g0519 204 Pfam Plant invertase/pectin methylesterase inhibitor 38 188 IPR006501 GO:0004857
Psa3g0519 204 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 21 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0519 Psa-Chr3 48941188 48942363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0519 39 197 Carbohydrate Esterase AT3G14310 35.366 2.55e-22 92.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0519 3 48941188 48942363 Psa3g0519 3 48941188 48942363 ECH